Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00145 ATGAACAATCTTGGAATAATGGGATTCATGTTCTTTCTATTCATTTATGGTGTGAAGATGGATCCGTCTCTTTTGAAAAAATCAGGGAAACTGCATTTATCTACTGCATTGGTTGGCATTACAATTCCCACAGTAACAGTGTTTACTGTGGGACTGTGCTTGAGAGAGAACATGGACAAAGATTTGGCCAGGGTTCCTTCAATAGGAGTATTAGCGGGGTACTTGGGGATCACAGCATTCCCTGTTCTCTACCATATCCTCAAAGAGTTTAACCTTCTAAATTCAGAAGCGGGGCGAATTGCATTAGCCTCAGCATTAATTGGTGACGCAATTGGTTTGTTTTCTGTCGTAGCGTTTGAGGCATTAGGTCATGGAGAAACAAAGATGATACATGCCCTGTGGTATATGATTTCTCTTGTGCTCATGGTAATATTCCTTGTGTTTTGTGTTAGACCTGCAATGATGTGGATCAATAGCAATACTCCTGAAGGGCACCCTGTGCAACAATCATTTGTAGTTGCCATTCTTCTAGGGGTTTTAATCATGGGTTTCATAACTGACATGTGTGGAATGGCAATTACTAATGGATCATTGTTTTTAGGCTTGGCAATTCCAGATGGACCCCACGTGGGAGCAACACTTGTAGAGAAGACCACAACAATTATGACTGATTTCCTTCTACCATTCTCATTCATTTTGGTGGGATCACACACTGATTTTTATGCTATGAGTGCTTCTGGTTGGTCCACCTTATCACCATTGTTTATCATGGTTTTTATTGGCTACATGTTCAAATTCTTTTGCACTTGGGTTACTTTACATTTGTGGCGAATGCCATTCAGGGATGGACTAACCATCAGCCTCATTATGAGCTTAAGAGGACACATTGAACTTCTATTGTTTCTGCAATGGATGGACAAAAAGATCTTAAAGGTGCCAGGCTTCACACTATTGGTTCTTATGACAACAATATTGACAGCAACTTTCTCTCCTTTGATCTCTCTATTGTATGATCCAACAAAGCCATACATGTTGAACCAAAGGAGGAACATTCAACACAACCATCCTGACACCGAGCTCAGATTAGTGTTATGCATTTTTGATACTGACTCCATAAATGGTCTGATAAAACTACTTGATATCTCCAATCCAACCCTAAACAGCCCCTTTTCAATTTCAGTTGTTAGACTCAGTGAGCGTGTAGGTCGAACCAGCCCTTTGTTCATAGACCATGAAAAGCAAAAAGTGCCTTCCATCTATCAATGGTCGAACACCATAAACATCCTTAAACATTATCAACAACTTAAAGGAACGGTCATGAAGCTTCATTTCTTCACAGCTGTGGCCCCAAAACAGTCGTTGTTCCAAGATATATGTGAGCTTGCTCTAGAAGAAGAAGCTTCTTTAATCATCTTACCTCATGCCCATAAACATGCAGTTAAAACAGTGAATTCACATGTCTTGAACACTGCACCTTGCTCAGTTGCAATTTTTGTTGACAAGGGTCTTCTTAAAACCAACACCTCCGAATGCAGTTCTTTTCGTCGATCTAAATATCGATTTGCCTTATTGTTTCTCGGGGGTGGAGATTCCAGAGAGGCTCTTGCTTATGCAGATAGGATTATTGATCACCATGATGAGGTGTCTCTCACAGTTATAAGGTTTCTCTCTCATAACTGCATAGGGTACAATGAAATCGAGAAAAAGCTTGATGATGGAATTGTGACCTGGTTTTGGGTTAAGAATGAGATTAATCATAGAGTGGTGTATAGAGAAGTGGTTGTTAAAAATGGAGAAGAAACAATTGGAGCAATTCAATCTATGAATGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACAAGGAATAAACCCTGTTCTTCTCACTGGATTATCAGAATGGAGTGAAAGTGAAGATTTGGGACTCGTTAAGGGTGTGTTTGGGTGTCGCGTTTTAGTTGGTCACTCTACTGCGTTAGAAATGGAGGACGACGGTTCCAGCTCGATCCGCCGCATGTCAAGTCGAACGCGAAAAGTTGCGTCCAAAATGGCCGCCGCACTTGCCAGTGCCGACAACCGCACTCAGGCAGCTATCTTCGCTCAATTTCCTTCCGCGGCACTTGCGCGCTTGGATGCTCTGGAGAATGACAATGCAGGTTTTGAAACCGCAGATGCCAATAACGATGACGACGAAGCTTCTTTAGACGAAGACGATCAATTTTATGTACAGAAAAAGCAGTCTAAGGGCACCAAAAGGAAAACCAGGCAGGCAAAAGCACTTGAAGCCAGGAGGACCCCGAGAACATTCCTTGAGCTCTTACATGAGGCTAACATAGAGTCATTGCCTCCTCATGTGCCCTCCTATTGGAAAGCAGCAGTTGGACCTCCAAGCTCAACCTCCCGTCGCCACTTTTGTACTGTTTGTGGTTTTTCTGCCAATTACACTTGTGTGAGATGTGGTATGCGCTTTTGTTCCTATAGATGTCAAAATGTGCACAATGATACTCGTTGCTTGAAGTTTGTAGCCTGA 2532 0.4206 MNNLGIMGFMFFLFIYGVKMDPSLLKKSGKLHLSTALVGITIPTVTVFTVGLCLRENMDKDLARVPSIGVLAGYLGITAFPVLYHILKEFNLLNSEAGRIALASALIGDAIGLFSVVAFEALGHGETKMIHALWYMISLVLMVIFLVFCVRPAMMWINSNTPEGHPVQQSFVVAILLGVLIMGFITDMCGMAITNGSLFLGLAIPDGPHVGATLVEKTTTIMTDFLLPFSFILVGSHTDFYAMSASGWSTLSPLFIMVFIGYMFKFFCTWVTLHLWRMPFRDGLTISLIMSLRGHIELLLFLQWMDKKILKVPGFTLLVLMTTILTATFSPLISLLYDPTKPYMLNQRRNIQHNHPDTELRLVLCIFDTDSINGLIKLLDISNPTLNSPFSISVVRLSERVGRTSPLFIDHEKQKVPSIYQWSNTINILKHYQQLKGTVMKLHFFTAVAPKQSLFQDICELALEEEASLIILPHAHKHAVKTVNSHVLNTAPCSVAIFVDKGLLKTNTSECSSFRRSKYRFALLFLGGGDSREALAYADRIIDHHDEVSLTVIRFLSHNCIGYNEIEKKLDDGIVTWFWVKNEINHRVVYREVVVKNGEETIGAIQSMNDGAFDLLIVGRKQGINPVLLTGLSEWSESEDLGLVKGVFGCRVLVGHSTALEMEDDGSSSIRRMSSRTRKVASKMAAALASADNRTQAAIFAQFPSAALARLDALENDNAGFETADANNDDDEASLDEDDQFYVQKKQSKGTKRKTRQAKALEARRTPRTFLELLHEANIESLPPHVPSYWKAAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSYRCQNVHNDTRCLKFVA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00145 843 Pfam Sodium/hydrogen exchanger family 7 332 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst6g00145 843 Pfam HIT zinc finger 802 830 IPR007529 -
Spst6g00145 843 ProSiteProfiles Zinc finger HIT-type profile. 806 838 IPR007529 -
Spst6g00145 843 PANTHER CATION/H + ANTIPORTER 2 646 - -
Spst6g00145 843 Gene3D - 1 342 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00145 Spst-Chr6 1628787 1635545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00145 3 665 Antiporter Super Family AT5G37060 41.738 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00145 K26731 - gmx:100783296 944.88