Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00129 ATGGCCGCAGCTTTGGAGTGCTGGTCGCGCCGCGCCACCGGCGACGAGGACGACGCATTCCTAGCCACGCATTCCTCACAACCCCGAGACTCTTCTTCTTCTTCCTCTTCATCCCTCGTCCACAAGAAGCTCCTCAAACTCACGCGCAACGTCTCCGAGGCTCTCTCCTCCCTCAGAAACTCCCTTAACGCCATGAATGATTCTTCCAAACCCGATACGCCTCGCAACCTCGTGTGGACAACCGTTGTGCGCAATCTCACCCACCTCTACCCCGGAACCCATCTTCCTGAGAAGCTTGTCTGCAACATTCGCAGGCACTATGACTCCCTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGATTTGTTTCTTCACATGAAACTGATGGAGCAAGCTCTGGAGGACGAACAGGCTGCGATTTTGATTCAAGAGGAAGGTGATAGTGAGATTCAACTCCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCATGGCCCGCCATGTCGGGTGCATTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATCTATGAGAAGATAGGATTCACCCTCGGTATTGTGCTTCTTCTTGTGCTGTTTAGTGGTGGGCAAGATAAGTTGGTCAGGACCCGTGTTGAAAGCGCTCTCAAGATTTCCATGAAGAGGCCCAAAGCCGGTGTGAAGCTTCCCTTTGGGCTCTGTGGATGTCAAGAGGAGAACACCAAGGAGAGAGGACTTGGAGAGATTGAGGAAGATAGTGGTGATGCATACTGTGGAAATGGGTTTGAGAATTTGAGCCAAAAGATTCAGCTTCAGGTGCCATTGCCTAGTTCATCTTTTCTCGTAGTGGTAGATGAGTGGCAGACTATTCAATCTGGTGGGGATGAGATTGAAAAATGGCTGTTGAATTCAGATAGTCTTGAGTTTGCAGAACAGGTTGGGCCCAATTCGTATAAGGGCATGTACATGGGGAAAAAAATTGGCATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGACCTACTGGCACTGATGACTTGTGGTCATAGAAATATTATGCAGTTTTGTGGTGTTTGTGTAGATGACAACTATGGTTTATGTGTATTGACAAAACTTGTGGAAGGTGGATCTGTTCATGACTTAATGATAAAGAACAAGAAGCTTCCGATCAAGGATATTTTAAGAATTGCAGTTGATGTGGCTGAAGGGATGCAGTTTATGAATGATCACGGTGTGGCATACAGAGACCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGTGATATGGGTATTGTCACTGCCTGCAAGAGTGTTAGAGAGGCCACGGATTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTGGTGACCCAGAGAGTGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGAATGATAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATATTCACCAGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGTCCTCAAACTCTCAAGTCTCTCATGACAAAATGTTGGAACAACACCCCTTCAAAACGCCCTAACTTCTCTGAAATTTTGGCCATATTGCTGCGACAAAACAACTACAATAGGTAA 1719 0.4666 MAAALECWSRRATGDEDDAFLATHSSQPRDSSSSSSSSLVHKKLLKLTRNVSEALSSLRNSLNAMNDSSKPDTPRNLVWTTVVRNLTHLYPGTHLPEKLVCNIRRHYDSLPLSYSQAGFDVKDLFLHMKLMEQALEDEQAAILIQEEGDSEIQLQGSLFKLTFACNSPISWPAMSGALDGYSICCKKIQIYEKIGFTLGIVLLLVLFSGGQDKLVRTRVESALKISMKRPKAGVKLPFGLCGCQEENTKERGLGEIEEDSGDAYCGNGFENLSQKIQLQVPLPSSSFLVVVDEWQTIQSGGDEIEKWLLNSDSLEFAEQVGPNSYKGMYMGKKIGIEKLRGCEKGNSYEFELRKDLLALMTCGHRNIMQFCGVCVDDNYGLCVLTKLVEGGSVHDLMIKNKKLPIKDILRIAVDVAEGMQFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACKSVREATDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMIIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPNFSEILAILLRQNNYNR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00129 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 72 564 - -
Spst6g00129 572 Gene3D Transferase(Phosphotransferase) domain 1 308 569 - -
Spst6g00129 572 ProSiteProfiles Protein kinase domain profile. 314 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00129 572 PRINTS Tyrosine kinase catalytic domain signature 421 439 IPR001245 GO:0004672|GO:0006468
Spst6g00129 572 PRINTS Tyrosine kinase catalytic domain signature 491 513 IPR001245 GO:0004672|GO:0006468
Spst6g00129 572 PRINTS Tyrosine kinase catalytic domain signature 535 557 IPR001245 GO:0004672|GO:0006468
Spst6g00129 572 MobiDBLite consensus disorder prediction 18 37 - -
Spst6g00129 572 SUPERFAMILY Protein kinase-like (PK-like) 306 564 IPR011009 -
Spst6g00129 572 Pfam Protein tyrosine and serine/threonine kinase 349 563 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00129 Spst-Chr6 1494348 1498144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00129 297 564 MAP Kinase Kinase Kinase AT2G17700 32.000 1.42e-49 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Spst6g00129 PK_Tyr_Ser-Thr 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00129 - - gmx:100811417 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00129 6 1494348 1498144 Spst6g00129 6 1494348 1498144 ECH
Spst6g00129 6 1494348 1498144 Spst8g00134 8 1108193 1112728 PCT