Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00125 ATGTCCATGGCTGGTTATGAGCAGGGAGATAGATGCTCTTCCATCAACATCCCCCTTCTGGATGATGAAAGAGTGAGCCAGGTGAATGGCTCAGATGAGGTGTTGGAGGCCAAAACTTGTGATCTGCACTCATCTCATCAGGGTAACACCTCCTTCTTCAAGACCTGCTTCAATCTGATTAACGCCCTCTCAGGAGTTGGTATTGTATCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCGCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGCATGTTGGTCAAAAGATGCATGGACATGGACCCTGATATCAGGACTTTCCCTGACATAGGTCAACGTGCATTTGGAGACAAGGGGAGGCTAATGGTATCAATTGCCATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAAGGGGACAATCTTGACAATCTACTTCCAAATATGCAAGTTCACCTCGCAGGGTTAACAATTGGTGGTGCAACAATTTTTACCATAATTGCTACCCTTATTATTCTGCCTAGTGTTTTGTTAGAGGATTTGAGCATACTGTCTTATGTGTCTGCAAGTGGGGCTTTGGCTTCTTCCATCTTCTTCCTCTCTCTATTTTGGAATGGTACCATTGATGGCACTGGATTTCATGCAAAGGGAACACTCTTTAGATTGAGTGGTATACCTGCTGCTGTCAGTTTATATGCCTTCTGCTATAGCGCTCATCCTATCCTTCCCATTCTTTACAATTCCATGAGAGACAAAACTCAATTCTCCAGGGTTCTATCTGCGTGCTTTTCAGTATGCACTATTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTAATGTTTGGAGAAGAGGTTGAATCACAGGTGACTTTGAACCTACCTACAAGCAAGTTCAGTTCACATGTGGCAATATTCACCACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACCCCAGTCATAAATGCAGTAAAAAACAAGATTTCATGGCATTACGACAAAAGATTCACACACATGCTTGTGAGTACCTCCATGCTCATCAGCACTCTAATTGTAGCTGTGGCCATACCCTTGTTTGGAAATCTCATGTCATTGATTGGGGCATTGCTAAGTGTGTCAGCTTCAATTTTAGTACCATCAGTGTGCTACTTGAAGATTTCAGGAGCATACAAGAGGTTTGGATCTGAAATGATCATCAACTATTCAATAATAGTATTGGGGGTTACCATTGCTGTTGTGGGTACTTATACATCGCTTGTAGAAATAGTTCATAATTTGTAA 1317 0.4214 MSMAGYEQGDRCSSINIPLLDDERVSQVNGSDEVLEAKTCDLHSSHQGNTSFFKTCFNLINALSGVGIVSMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGFLILEGDNLDNLLPNMQVHLAGLTIGGATIFTIIATLIILPSVLLEDLSILSYVSASGALASSIFFLSLFWNGTIDGTGFHAKGTLFRLSGIPAAVSLYAFCYSAHPILPILYNSMRDKTQFSRVLSACFSVCTIGYAAAGVLGYLMFGEEVESQVTLNLPTSKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKISWHYDKRFTHMLVSTSMLISTLIVAVAIPLFGNLMSLIGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIVLGVTIAVVGTYTSLVEIVHNL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00125 438 PANTHER AMINO ACID TRANSPORTER 43 429 - -
Spst6g00125 438 Pfam Transmembrane amino acid transporter protein 49 430 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00125 Spst-Chr6 1451717 1455409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00125 35 435 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.488 4.90e-153 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00125 K15015 - gmx:100784690 759.985