Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00124 ATGGCTCCGGAGGAAGGTAGTTATGATAGATTTTCCACCATCACTATACCCCTTCTGAGGGATCGAGAGGTGCACCAAGACAAAACTTTTGACCAGAATGTGGGTGGCACCTCCTTCTTCAAGACCTGTTTTCATTTGGTTAACGCCATCTCAGATAGGGGTTTTTGTTCAACTTTAAGGCTTAGGAGATTTGGATCTGTTTCTCCAGGAGTTGGTACAATATCCGCGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCGCTGCTCTTTCTGATTGCCATTGCTTGCTATTACACTGGCATATTGATCAAAAGATGCATGGACATGGACCCTGACATCAAGACTTTTCCTGACATAGGTCAACGTGCATTTGGAGACAAAGGGAGGCTATTGGTATCAATTGCCATGAATGCTGAGCTCTACCTAGTTGTTACAGGTTTTCTGATTTTAGAGGGTGACAATCTTAACCAACTAGTACCAAACATGCAAATTGACCTTGCAGGGTTAACAATTGGTGGTACCACAATTTTCACCATAATTTCTGCCCTTATTGTTTTGCCTACTGTTTTGTCAGAAGACATGAGCTTGTTATCTTATGTATCTGCTGGTGGGGTTTTGGCTACTTCTATTTTTCTCCTCTCTCTGTTATGGAATGGCACTTTTGATGGCACAGAATTTCATGCAAGTGGAACACTTTTCAAATTGAGGGGAATACCTTCCTCTCTAAGTTTATATGCCTTTTGTTTTAGTGCTCATCCAATCATTCCCAGTCTATACGTCTCTACGAGAAACAGAAGTCAGTTCTCTAAAGTCCTGTTTGTATGTTTTTTAGCATGCACTCTTGTTTATGCAGCAGTGGCTGCTCTGGGCTTCTTAATGTTTGGAGAAGATGTGAAATCGCAAGTTACTTTGAATCTCCCAAGGGGCAAGTTCAGTTCACATGTAGCAATATACACTACCTTGGTTAATCCTTTAGCCAAATATGCATTGATGCTTTCTCCAATCATAAAAGCAGTAAAAAACAAGGTTTCATGCCATAACCAAAAAAGGTTCACACATATGCTTGTTAGTACCTCTTTGCTGATAAGTACCATGATTATAGCTGTGACCATTCCCTTATTTGGATCCCTTATGTCACTTACTGGGGCATTACTAAGTGTGTCAGCTTCAATTTTAGTACCATCAATGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTCGGGTGTGAAATGATCACTAACTACTCAATAATCGTAATGGGGTTTCTTATTGTTGTTGTAGGCACTTACACATCTGTTATGGATATAGTTCATAATATTTAA 1332 0.4024 MAPEEGSYDRFSTITIPLLRDREVHQDKTFDQNVGGTSFFKTCFHLVNAISDRGFCSTLRLRRFGSVSPGVGTISAPYALASGGWLSISLLFLIAIACYYTGILIKRCMDMDPDIKTFPDIGQRAFGDKGRLLVSIAMNAELYLVVTGFLILEGDNLNQLVPNMQIDLAGLTIGGTTIFTIISALIVLPTVLSEDMSLLSYVSAGGVLATSIFLLSLLWNGTFDGTEFHASGTLFKLRGIPSSLSLYAFCFSAHPIIPSLYVSTRNRSQFSKVLFVCFLACTLVYAAVAALGFLMFGEDVKSQVTLNLPRGKFSSHVAIYTTLVNPLAKYALMLSPIIKAVKNKVSCHNQKRFTHMLVSTSLLISTMIIAVTIPLFGSLMSLTGALLSVSASILVPSMCYLKISGAYKRFGCEMITNYSIIVMGFLIVVVGTYTSVMDIVHNI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00124 443 PANTHER AMINO ACID TRANSPORTER 28 434 - -
Spst6g00124 443 Pfam Transmembrane amino acid transporter protein 70 436 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00124 Spst-Chr6 1406824 1410053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00124 21 443 Amino Acid or Auxin Permease AAAP Family AT3G28960 49.528 4.89e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00124 K15015 - gmx:100784690 611.683