Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00123 ATGATGGAAGAACGGTGGAGGTTCATCACTCGGTGGAAGCTATTACGCGTGCTTTTGTCAGTGGTGTCTCTGTTATCCTCGTTCACCATGGAACCTGTTTGGTGTTCCACTCTCAACTCCGAAGGGTTGGGTCTGCAAAAGATGAGAGAGAAAGTGGTGAGAGATCCATTGGGTGGTTTACGGAGTTGGAATAGCAGAGGAGTGGTTGATCACTGTTCCTGGTTCGGAGTGGAGTGCTCCCATGGCCATGTTGTATCCTTGAACCTGAAAGATCTCTGTCTCCACGGAACACTAGCACCTGAAATTGGGAAGCTAGTTCACATAAAATCAATTATTTTGCGCAACAATTCTTTCCATGGAGAAATCCCTAAGGAAATACTACAATTAGAGGAGCTAGAAGTTCTTGACTTAGGATATAACAACTTTAGTGGACCATTTCCATCTGAAGAACTTGGCAGCAATCCATCCCTCACTACCCTTTTATTGGACAACAATGGCCATCTTTCCTACTTAACTCCGGAGGTGTATAAGCTCAAGACATTTTCTGAAATGCATGTAGATGAAGAACAACTATCTGGTCCTACTACTAGAGAAGCATATGTTACCAAATCAAATATCAGGCACATTGGCCAACATGGGGATCCAACACACAGAAGGGAACTTCTCCAAGCAGCAAATGGTGCTGAGAGGGGTGATGATGACAAAGAAACTCTTTCACCATCACCTTTTCCCTCTTCACTATCACCACTTTCAGAGCCTTTTTCACCATCACCATCAGAGAGTCCTTCAGATTCACCAACATCTCCAGAGCTTTCCCCCTCACCATCTCCATCTCTCTCTGGTTTCTTTTTCTCTCTTTCACCCTCGCCTTCACCTATGGTAGCACCAACTCCAGACACATCACCTCCAGAAAATCCACCTTTGGTTGTATCCACACCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTGCAAACAGTTCAAACCCAAACCAACACACTGTGATTATGTGGTCCACAGTTGGGGGCTTGTCCTTGATTTTGGTGTCAGCTATTGTTTTTCTTTGCTTCAGAAGTAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAACTACAGAAGGCATTTTTATCAGGTGTTCCAAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTGTTTATAAGGGGACTCTTTCCAGCGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGACTTCATCCCAAAACTGGTCCAAAAATATGGAAAGTCAATTCCGAAAGAAGATAGCTATGCTGTCAAGAGTAAACCACAAAAATTTTGTGAATCTTATTGGATATTGTGAAGAGAACAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATTTGAGCATCTACACGTTAAAGAGGCAGAACGACTAGACTGGGGAATGAGAAAGAGGATAGCTATGGGAATAGCCTACTGTCTGGAGCACATACATCAGCTGACACCACCCATTGCCTATAAAAACATACAATCTTCCTCGATATATCTGACGGAAGATTATGCTGCTAAACTATCAGACCTTAGTTTCTGGACTGACATAGTCTCTACGAAGAAGGGTTTTGAGTCCACACAGCTCTTAGAAACAGCTTCAGAATATATCAAGGCCAATGTTTACAGCTTTGGAGTACTGTTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGATGATTGGGCAGCAGAATATATAAAGGGACAACCTTTGAGAGATGTGGTGGATTCAAACCTGAGCTCTTTGCAAGCAAATGAAATCGAGAAATGGGAAGAAGTGATTAACATCTGTGTGGATCCAGATCCAGAAAAAAGGCCAACTATGAAGGAGGTTACTTCTAAGTTGAAGGAAATCACCTCCATAGGACATGATGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTCAATCCATAA 2091 0.4299 MMEERWRFITRWKLLRVLLSVVSLLSSFTMEPVWCSTLNSEGLGLQKMREKVVRDPLGGLRSWNSRGVVDHCSWFGVECSHGHVVSLNLKDLCLHGTLAPEIGKLVHIKSIILRNNSFHGEIPKEILQLEELEVLDLGYNNFSGPFPSEELGSNPSLTTLLLDNNGHLSYLTPEVYKLKTFSEMHVDEEQLSGPTTREAYVTKSNIRHIGQHGDPTHRRELLQAANGAERGDDDKETLSPSPFPSSLSPLSEPFSPSPSESPSDSPTSPELSPSPSPSLSGFFFSLSPSPSPMVAPTPDTSPPENPPLVVSTPPQSNWVSMPSPASSANSSNPNQHTVIMWSTVGGLSLILVSAIVFLCFRSNKVVTVKPWATGLSGQLQKAFLSGVPSLKRTELEVACEYFSNIIGSLPDGTVYKGTLSSGVEIAVVSSAVTSSQNWSKNMESQFRKKIAMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHVKEAERLDWGMRKRIAMGIAYCLEHIHQLTPPIAYKNIQSSSIYLTEDYAAKLSDLSFWTDIVSTKKGFESTQLLETASEYIKANVYSFGVLLFELITGRIPFAVENGLFDDWAAEYIKGQPLRDVVDSNLSSLQANEIEKWEEVINICVDPDPEKRPTMKEVTSKLKEITSIGHDGATPKASPLWWAEIEIMSTDLSSDVNP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00123 696 FunFam Inactive receptor-like serine/threonine-protein kinase 374 482 - -
Spst6g00123 696 SUPERFAMILY Protein kinase-like (PK-like) 386 660 IPR011009 -
Spst6g00123 696 ProSiteProfiles Protein kinase domain profile. 400 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00123 696 MobiDBLite consensus disorder prediction 227 333 - -
Spst6g00123 696 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Spst6g00123 696 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Spst6g00123 696 MobiDBLite consensus disorder prediction 246 273 - -
Spst6g00123 696 PANTHER PROTEIN MALE DISCOVERER 2 19 688 - -
Spst6g00123 696 FunFam Leucine-rich repeat receptor-like kinase 47 157 - -
Spst6g00123 696 Pfam Protein tyrosine and serine/threonine kinase 405 660 IPR001245 GO:0004672|GO:0006468
Spst6g00123 696 SUPERFAMILY L domain-like 54 196 - -
Spst6g00123 696 Gene3D Transferase(Phosphotransferase) domain 1 483 671 - -
Spst6g00123 696 Gene3D Ribonuclease Inhibitor 37 235 IPR032675 -
Spst6g00123 696 MobiDBLite consensus disorder prediction 311 333 - -
Spst6g00123 696 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00123 Spst-Chr6 1398041 1402513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00123 379 663 Receptor kinase-like Gene Family AT1G69730 33.762 1.74e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst6g00123 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00123 - - gmx:100814122 1039.25