Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00120 ATGGATTCTTCCTCAAACCATGCTGAACAACCACAGCAACATGACACAGATCCTAACGTGCAACAGAACGTAATGGATCCAAAATTAAGGAGAATCTTCTCAAATCGGCTTTCTGCTAAAAGATCAAGGCAGAAGAAGGTGAAATTTGTTGAAAATTTGGAAGATCAGTCCAAAACTTTGCAGACGAGTCTTGCCAAAATGGAACAAGTAGCCCAACTTCAACCACAACAAGCTTCCCACCAAAACCAAATGCAGTGTCTTGTGGCGGAAGAACAGACATTGCTCCACGAAATGGAATATCTTCAGAATAAGGCATTGATCAGAGATGCTGAAGATGAGAAGTTGAAGGAAAAAATTAGTAGATCAAAGGAAGTTCGAAATATCAAGCAAGATGAATTCATTAACGTGGATATTGATCTGCTGGATGTAGAGTCCAATGACTCATCTTCATATCCAGGTACCAATATAGCTGCAGAGGCAACGCAGATGGAGAAAGCTGCTATGGCGGGTACGCATGAAATGATGGATCAGACGAAACTCGCAAGCCATCTGTGCCAATCCCTTCTTAGCCATTACATCAAACCCAGTGCTGGTTGGCGTCATGTTTCTGTGAAGTTTTATTACACTAATAATTCTGCAAACTTCAGAAACCGAAATTATGATTGCCAGTAA 672 0.4107 MDSSSNHAEQPQQHDTDPNVQQNVMDPKLRRIFSNRLSAKRSRQKKVKFVENLEDQSKTLQTSLAKMEQVAQLQPQQASHQNQMQCLVAEEQTLLHEMEYLQNKALIRDAEDEKLKEKISRSKEVRNIKQDEFINVDIDLLDVESNDSSSYPGTNIAAEATQMEKAAMAGTHEMMDQTKLASHLCQSLLSHYIKPSAGWRHVSVKFYYTNNSANFRNRNYDCQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00120 223 MobiDBLite consensus disorder prediction 1 26 - -
Spst6g00120 223 SMART brlzneu 24 86 IPR004827 GO:0003700|GO:0006355
Spst6g00120 223 Pfam bZIP transcription factor 28 68 IPR004827 GO:0003700|GO:0006355
Spst6g00120 223 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Spst6g00120 223 PANTHER BASIC LEUCINE ZIPPER 34 5 146 - -
Spst6g00120 223 MobiDBLite consensus disorder prediction 1 23 - -
Spst6g00120 223 SUPERFAMILY Leucine zipper domain 28 72 IPR046347 GO:0003700|GO:0006355
Spst6g00120 223 Coils Coil 50 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00120 24 123 bZIP Transcription Factor Family AT2G40620 33.663 1.36e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst6g00120 bZIP_1 3.5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00120 - K09228 pvu:PHAVU_006G071300g 143.665