Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00115 ATGGAATTCAACAAGTGCAGAATCAGAAGTTATGAGGGACAATACGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGTGAGGTAGGACCATCAGAAAGCGTGTTCCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGAAACAGTCCAATGTACATGATGCTGGTGGCAGAGTTGGAGAATGAATTGGTTGGTGTGATTCAAGGGTCTATAAAGGTGGTGACGGTTCATGGTCATCCTCCAAAGGATTTGGCGAAGGTGGGGTATGTCCTTGGCCTAAGGGTATCACCCCATCACCGAAGAAAAGGGATTGGCTCAAGCCTTGTGAGAAGGCTAGAAGAATGGTTCAGTTCGAAGGATGTGGACTATGCATATATGGCAACAGAAAAAGACAACCATGCCTCGGTTAGTCTCTTCATGGACAAGTTTGGCTACACCAAGTTCAGGACTCCAGCTATTCTTGTGAATCCGGTGAACCATCATTGCTTTCAAGTATCATCCAACATTGAGATAGCAAGGTTGAAGGTTGACCAAGCTGAATACATCTATAGAAGATTCATGGGGTCCACAGAGTTCTTTCCTAATGATATAGGAAGCATACTCAGGAACAAGCTGAGTCTGGGAACATGGGTGGCCTATTTCAAAGGAGATATTGCTTGGGGGGATTTCGGTTCAGATGGACAAGTCCCTAATAGTTGGGCTATGCTGAGTGTATGGAACAGTGGGGAGATATTCAAGCTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGTTATGCACCAAGAGTTGGTGGTTGATTGATAAAATCTTCCCATGCTTGAAATTGCCCACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCATGAAGGCTCATTCTCAGGGAAGCTAGTGAGAGCCTTGTGCCAATTTGTGCACAACATGGCTGCTGAATCCAAGGGTGAGAATTGCAAGATCATTGTGACTGAAGTTGGAGGAAGAGATGAGTTAAACCATCATATTCCACATTGGAAATTGCTCTCATGCCCAGAAGACTTGTGGTGCATAAAGTCATTGAAAAATGAAGGGACAAATAACAAGTTCCATGAATTAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1170 0.4419 MEFNKCRIRSYEGQYDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRRLEEWFSSKDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHCFQVSSNIEIARLKVDQAEYIYRRFMGSTEFFPNDIGSILRNKLSLGTWVAYFKGDIAWGDFGSDGQVPNSWAMLSVWNSGEIFKLRLGKAPFSCLLCTKSWWLIDKIFPCLKLPTIPDFFNPFGFYFMYGVHHEGSFSGKLVRALCQFVHNMAAESKGENCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKSLKNEGTNNKFHELTKTPPTRALFVDPREV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00115 389 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016747
Spst6g00115 389 CDD NAT_SF 57 128 - -
Spst6g00115 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 152 IPR016181 -
Spst6g00115 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 389 - -
Spst6g00115 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016747
Spst6g00115 389 Gene3D - 16 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00115 Spst-Chr6 1320123 1321508 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst6g00115 Acetyltransf_1 1.1e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00115 - - gmx:100799507 776.163