Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00114 ATGGAATTCAACAAGTTTAGAATCAGAACCTATGAGGGGCGATATGATAGGGCTCAAGTGGAATATCTTGAGAGAATATGCGAGGTAGGGCCATCAGAAAGCGCGTTCCTCTTCACAGACACCATGGGTGACCCCATTTGTAGGATCCGAAACAGTCCAATGTACATGATGCTGGTGGCAGAGTTGAAGAATGAACTGGTTGGTGTGATTCAAGGGTCTATAAAGGTGGTGACGGTTCATGGTCATCCTCCAAAAGGTTTGGCAAAGGTGGGGTATGTCCTTGGCCTCAGGGTATCACCACATCATCGAAGAAAAGGGATTGGCTCAAGCCTTGTGAGAAGGCTAGAAGAATGGTTCAGTTCGAAGGATGTGGACTATGCATATATGGCAACAGAAAAAGAAAACCGTGCCTCGGTTAGTCTCTTCATGGACAAGTTTGGCTACTCCAAGTTTAGGACTCAAGCTATTCTTGTGAACCCGGTGAACCATCACTGCTTTCAAGTATCATCCAACATTGAGATAGCAAGGTTGAAGGTTGACCAAGCTGAATACCTGTATAGAAGATTCATGGGGTCCATGGATTTTTTTCCTAATGACATAGGAAACATACTTAGGAACAAGCTATGTTTGGGGACTTGGGTGGCCTATTTTAAGGGAGACATTGCTTGGGAGGACTTTAGGTCAGATGGACAAGTGCCTAATAGTTGGGCTATGCTGAGTGTATGGAACAGTGGGGAGATATTCAAGCTAAGGCTAGGGAAAGCACCTTTATCTTGCTTGTTATGCACCAAGAGTTGGTGGTTGATTGATAAAATCTTCCCGTGCTTGAAATTTCCTACCATACCTGATTTCTTCGACCCATTTGGATTCTATTTCATGTATGGGATGCACCATGAAGGCCCATTCTCAGGGAGGTTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGCTGCTGAAACCAAGGATGATAATTGCAAGATCATTGTGACTGACGTTGGAGAAAAAGATGAGCTCAATCATCATATTCCACATTGGAAATTGCTCTCATGCCCAGCAGACTTGTGGTGCATAAAGTCATTGAAAAGTGATGGAACAAACAAGTTTCATGAGTTAACCAAAACCTCACCAACAAGACCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1167 0.4387 MEFNKFRIRTYEGRYDRAQVEYLERICEVGPSESAFLFTDTMGDPICRIRNSPMYMMLVAELKNELVGVIQGSIKVVTVHGHPPKGLAKVGYVLGLRVSPHHRRKGIGSSLVRRLEEWFSSKDVDYAYMATEKENRASVSLFMDKFGYSKFRTQAILVNPVNHHCFQVSSNIEIARLKVDQAEYLYRRFMGSMDFFPNDIGNILRNKLCLGTWVAYFKGDIAWEDFRSDGQVPNSWAMLSVWNSGEIFKLRLGKAPLSCLLCTKSWWLIDKIFPCLKFPTIPDFFDPFGFYFMYGMHHEGPFSGRLVRALCQFVHNMAAETKDDNCKIIVTDVGEKDELNHHIPHWKLLSCPADLWCIKSLKSDGTNKFHELTKTSPTRPLFVDPREV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00114 388 CDD NAT_SF 57 128 - -
Spst6g00114 388 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 162 IPR000182 GO:0016747
Spst6g00114 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 388 - -
Spst6g00114 388 Gene3D - 20 157 - -
Spst6g00114 388 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 32 150 IPR016181 -
Spst6g00114 388 Pfam Acetyltransferase (GNAT) family 48 148 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00114 Spst-Chr6 1313302 1314667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst6g00114 Acetyltransf_1 4.6e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00114 - - gmx:100799507 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00114 6 1313302 1314667 Spst6g00114 6 1313302 1314667 ECH
Spst6g00114 6 1313302 1314667 Spst8g00127 8 1051174 1052457 PCT