Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00113 ATGGCGGCGTGTGTGACGGATATGGCTCAGGCCACCGTGTGCCGCAACGGTATCGCGGCGGCACACTTAAAAGTGATTTCCATCTTCACAATATTTGTGACCAGCGTAGCCGGCGTTTCAGCTCCGGTCATGCTAGCACGGTATTTTCAAGGAAAGTCTCTCTATGATATAGCCATTTTGGTTATCAAATGCTTTGCTGCCGGTGTTATTCTTGCAACTTCATTGGTCCATGTGTTGCCGGATGCCTTTGCCGCGCTCTCTGATTGTCAGGTGGCATCACAACATCCTTGGAAGGATTTTCCCTTTGCTGGGCTGGTGACCCTGGGTGGGATTCTGATGGCTCTGCTGGTGGACACTGTTGCGAGCTCTCACGTGCAGCACACGCACTACACGCCAGTGGAGACGGAGGAGAAGGAGGGTGGCAGCGGAGCATTGAGTATCGAGCTGGTTAGTGGCGGTGGTGGCGGAGAAGTGGAGAGGGTGGAAGAGTTGATGAGGTTGAAGCAGAGGCTGGTGTCGCAGGTGTTGGAGATAGGGATAATCTTTCACTCTGTTATCATTGGAGTGACTATGGGAATGTCTCAGAATGTTTGCACCATTCGCCCACTCGTTGCTGCTTTGGCATTTCATCAGATTTTCGAAGGCTTGGGTCTTGGTGGTTGCATTGCTCAGGCAGGGTTTAGCTTTGGAACAACTGCGTACATGTGCTTCATGTTCTCAGTGACAACACCAATGGGGATAATTTTGGGGATGGTGTTATTCTCAGTGACTGGTTATGATGATAGTAACCCTAAAGCCTTGATCATGGAAGGTTTACTTGGTTCAGTTTCTTCAGGGATACTAATTTACATGGCTCTTGTTGACCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGTTGAAAAAGCTCTCTTTTGTTGCATTAACTCTTGGCTCTGCTTCAATGTCTGTTCTAGCACTTTGGGCTTGA 987 0.4843 MAACVTDMAQATVCRNGIAAAHLKVISIFTIFVTSVAGVSAPVMLARYFQGKSLYDIAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGILMALLVDTVASSHVQHTHYTPVETEEKEGGSGALSIELVSGGGGGEVERVEELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGLGLGGCIAQAGFSFGTTAYMCFMFSVTTPMGIILGMVLFSVTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKLSFVALTLGSASMSVLALWA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00113 328 PANTHER ZINC/IRON TRANSPORTER 21 322 - -
Spst6g00113 328 Pfam ZIP Zinc transporter 22 325 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst6g00113 328 NCBIfam ZIP zinc/iron transport family 9 328 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00113 Spst-Chr6 1292500 1293877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00113 1 328 Inorganic Solute Cotransporters AT2G30080 65.805 2.46e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00113 K14709 - gmx:100784745 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00113 6 1292500 1293877 Spst6g00113 6 1292500 1293877 ECH
Spst6g00113 6 1292500 1293877 Spst8g00126 8 1040344 1042532 ECH
Spst6g00113 6 1292500 1293877 Spst8g00126 8 1040344 1042532 PCT