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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Spst6g00112
ATGCCAACCCAACCCGACTCACCCAACACGTTGACCCAAATGTTTCAGAACATTTTTTCAGACAACAGTAACATCATGCTTGCAGCCATCATTTCCCTTCTCCTTGTCATCCTCTTTGTCCTCCTTCTCCACCTCTATGCCAAATGGTTCCTTGCTCAGGCCCAGGCTCAGGCACACGCCCGCCGTCGCCGACGCCGACGCCGAACGACGGTGACTGTCTCCGACGTCCTTGGCCCGGCAAGGTTCCACCACTTCCACAGCTTCAACATCGAAGACTCCTCACCCCTCTCAACCAAAGGCCTTGATTCTTCCACCATTAGAGCAATTCCTCTCTTCATCTATGAGCATAACAACAAGGCCAACGAAAATGAAGAAGAAGAAGAAGAAGAAGAACTTGAATGCGTGATTTGTTTGAGTGCCTTTGAGGGAGGTGAGGTGGGAAGGTGTTTGCCAAAGTGTGGCCATGGTTTTCATGTGGAGTGCATTGACATGTGGTTGAGTTCACACTCCAATTGTCCTATTTGTAGAGCCCCCATCGTAGTAAGTGTTGTTGAGAGTGATTCTTCTCAGGTTGTGTCTTCAAGAGATCATGGTGATGAATACGGTGGTTCTGATTTTGAGATTGTGGTTGATGCTGGTTCTGATGAGACTAGAGCGAGTGAGCATGGGAATGGGAATGGCAACGGAGGAGCAAGAGCAAGTGTTTCTGTGTCAGAAACTTCTTCATCGTTTTTTGGGTGCTCTTTGGAGAGAATGCTTGGCAAGGTTTTCCCATCGACTAATTAA
786
0.4822
MPTQPDSPNTLTQMFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQAHARRRRRRRRTTVTVSDVLGPARFHHFHSFNIEDSSPLSTKGLDSSTIRAIPLFIYEHNNKANENEEEEEEEELECVICLSAFEGGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRAPIVVSVVESDSSQVVSSRDHGDEYGGSDFEIVVDAGSDETRASEHGNGNGNGGARASVSVSETSSSFFGCSLERMLGKVFPSTN
261
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Spst6g00112
261
SMART
ring_2
134
175
IPR001841
-
Spst6g00112
261
Coils
Coil
113
133
-
-
Spst6g00112
261
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
83
181
IPR013083
-
Spst6g00112
261
CDD
RING-H2_EL5-like
134
176
-
-
Spst6g00112
261
Pfam
Ring finger domain
133
176
IPR001841
-
Spst6g00112
261
ProSiteProfiles
Zinc finger RING-type profile.
134
176
IPR001841
-
Spst6g00112
261
PANTHER
RING-H2 FINGER PROTEIN ATL51-RELATED
19
181
IPR044675
-
Spst6g00112
261
FunFam
RING-H2 finger protein ATL1
87
181
-
-
Spst6g00112
261
SUPERFAMILY
RING/U-box
122
182
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Spst6g00112
Spst-Chr6
1283202
1283987
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Spst6g00112
17
227
Rapid Response to Elicitors
AT3G16720
33.175
3.94e-30
112
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Spst6g00112
-
-
pvu:PHAVU_006G070000g
392.119
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Spst6g00112
6
1283202
1283987
Spst6g00112
6
1283202
1283987
ECH
Spst6g00112
6
1283202
1283987
Spst8g00125
8
1037202
1037912
PCT
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