Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00104 ATGGAGGGTCATGATAATGACGAGAACAGAAATCTCAGACGAAATATCTCAAGAAAGCTTGATGTGAATGCGAAAGTGGAGGTTTCTATTCGTTTTGATTTAGTTGTGGGCTATCCATTTGAAGGATGGTTTGGTTGTCATCGAAAAAGTGGAACTCCATCTGCTTCTGAAAACCTTGTAAACCTGAAAATGCTGACGGTGATCATGGGAGAAAGGTGTGGGATGGAGTGCATGGGGAATAGGGATGTGAGGAAGGGTATTTGGAAAGGGGTGAGGAGTATGGAAATTGGGTTTCAAGGATCGTGGCACCCTGGGACAGTTATCCTGTGTGAGGATTTGCAAAGGCGTGTCAGATATGACAATATTTTGGATGATAATGGGGTAGATTATCTTGAGGAGGTAGTGATTGTTTCAAAAGCTTTGGACGGTGATATTGAAGGTGCAAACTGCTACGCACGAGGGTCCATTAGGCCATTGCCTCCTTTGATTGAGCTCGATAAGCGGGACCTTATATTTGGTCTGTGTGTTGATGTTAACTATGCGGAAGCTTGGTGGGAAGGTGTTATATTTGACCATTGTGATGGAATCGACAAGAGGATTGTGTTTTTCCCTGATTTGGGTGATGAAATGCAGGTTGGGATTCATCAGTTGCGGATTACTCAGGACTGGGATGAAATTATCGAGGAGTGGACCCGGCGAGGTAACTGGGTGTTTCTTGATTTGATTGAGGAGCAGAAGAGGAAATTTTTTATCGCAGTTTCGGCCAAGCAGATTTGGTATGATTTACGCTCAAAAGAGGAATTTGAGACGATTAAAGAGTGGACATGTAATTTGAAGTACCTGTGGACAAAGTTGATAACGAAGGTAGTTAATCACTACTTATCTCTTACACTAAATGAAATTATTTCTGTCGGAAACCATCCAGGGAGTTTATTAAAAGAAACATCAGAGGAGGAATTTGCTGAAGCTACGGCCAATGTTGACTTGAGCATGATCTTGCATGATAAGGAAATTGTTGTGCAGAATGAGCCTGTCCTTCCTGTTAAAGAGTGTGTACCAGAGTTTCAAAATAAAATTAGCCGCTATGGTGATAGTCCTTTTGAAGAAAATCAAGAAGATAGATCCTCAAGTCATTTAACGTCCACTTACTGGAAACCTTTGAATTTGTCTGAGGTTGAATTATGCTCTGATGCTGTTATTGAATATCCGCTTGCTTCCAAACGTGAAAGGCCATTTTGGATGGACAAATTACAGAAACATCTTTTATGTCTTGGATGGAAAATTGAGTGGTCAAATAGATTAAATATTAAACGTTATAGGTATATTGCCCCTCCTGCGCAGGGCCAAAAGTGCTATTTTTCACTCCTTCAAGTTTGTAAAGCTATGAAACAGGACCCCAACATGAACTCTTTGCATCTCCAAAATGACCGCATTATAATGCATCCTACAGTTGATTGTCATATTTCAGATGTGCCTGATAATCCAGCTGAAAATATTCAGAATCTAGATATCCTTCCTCTAGCTGTGCCATCTTCTCTAGTTGAAGTGCCTGCTAATCCAGCTAAAAATATTCAGAATCTAGATATCTTTCCTCTAGCTGTGCCATCTTCTCCAGTTGAAGATGAAGTTGATGATGTACCTGAGTATTGTCCTCGGGCTGTTGTGCAGTATTATCGCTTGTACATATCCAATAAGAGTCGGGCTGAAAAAAAACAATGGATAGTAAAGGCAAAGAAGCATCTGTTAGCAGAGGGATGGATATTTGACTATCCACCTCCATCTAATAAAAGAAGGGGAATAATATACATGTCTCCTCAAAATCGGAAATTCACTACACTCCATGCAGCATGCAAATTTTGTATTGAAGAAAGTATTCCTAATTGGGACCTTGAATGGAAGGCGATGGATGAAGGTGCTTCTAGTAGTAAATCTACTACAAACCAAAAGAAGAAAAGCAAGAGGGATTTGAAGGCCAACCTACCACCTAAGTTCCAAAGCAATGGGTTACCTCTACAGGTGCTAAGATCAAATAAGAGGGTGCAAAAGGTTTCTGGCCCTGCTCATTTACATCATAAGCCTCTAAATATTCCGTCTTTCTTGATAGACAACGGTATCATCGTACCAAGGTCTAAGGTTTATTATAAGACAAAAGGCAGACACCGTACAGTCCGTACTTTGGCTGAGGGAAAAATAACTGGCGATGGAATCAAGTGTAACTGTTGCCTCGCGATATACAGTTTTTCTGCATTTGAAAACCATGCTAGTGGCAGTAGTACCTGCAGACCCTCTGCTAGTATCTTTTTGCAAGATGGTAAGTCACTCTTGGATTGCCAGATGCAAATGATGCAAAGTCACAGGACAAGGGAAGCTAGTGGAAAATCATTAAGTGGTATGTCTCTAGCTGAGAATGACTACATTTGTTCAGTTTGCCACTATGGTGGTGAGCTTGTTTTATGTGATAAATGTCCATCTTCATTCCACAAGACGTGTCTTGGTTTGAAGGATATCCCTGAAGGCGACTGGTTTTGTCCATCCTGTCGATGCGGGATTTGTGGCCAGAGGAAAATGGATGGAGATGAGGTTGAACATTTTCTTCCTTGCATACAGTGTGAACATAAATATCATGTTAGATGCCTGAAAAATGGAGCTTCAGATACATCAAGACATAATGGAAACTGGTTCTGTGGAATAGATTGTGAAAAGATATATAAGGGCCTTCATAAATTATTAGGAGAGCCAATTCCAGTGCCTAACAATCTAACTTGGACGTTGGTCAAGTTTATCAATCCAGACAATTGTGATCTTGTTAATATTGAAAGTGACTTATTGGCAGAAAGTTACAGCAAACTCAATCTTGCTCTTTCGTTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCCTTGACTGGAAGAGATCTTGTGGAAGATGCTATATTCAGCAGATGGTCAGAAATTGTTATCCTTCAAGACATGGTCACTATGTCAGAACTTAATCGAATAAATTTCCAGGGATTCTATACTGTCTTACTTGAGAGAAATGAAGAACTGGTTAGTGTGGCAACTGTTAGGGTCCATGGGAAGAAAGTAGCTGAAATACCTCTTGTTGGTACCAGATTACAATATCGTCGACATGGGATGTGTCGCATTTTAATTAATGAGCTTGAGAAGAAGCTCGTGCAACTAGGTGTGGAGAGGCTGGTTTTGCCAGCAGTTCCGAGTGTGCTAGAGACATGGATAAACTCTTTTGGCTTTACGAAGATGACTAATTATGAGAGATCTCAGTTTTTGGATTACACTTTCCTAGATTTTGAGGGTGCTATCATGTGCCGAAAGTTGTTGATGAATATTGCATCTTCAGAATCACTTCTATTAATAGGTACATCAGAGTCTGGGAGATGTGTTGATCACAGTAAGTCTAACCCAGTCTTTGAAGTGGAGGAGATTGACGAAGAAGGGGCGATGGATCAACGAATGGAAGAGTTCTTCGTTCCTAGAAAAAGGGGTAATCAACCCTTCTGGGCCGTGAGTATATGCTCTCACGGGGCAAGTATTGTGAGATGCAAGTTGGATTCTTACACAATAGATGCATATCACCGAGACAATGCAACCACGGAAAGCTTGAGACACCACCGCAACACCCTCCACCAGCAGAGACCCATGATCCATGCCAACCAAACCAACTGTGCACTCTTTGTGGGAACTTGGGTTGAAGATGACTCATACCCTCTCTACCAATCCTCCAACTGCCCCATCATAGATCCTCAGTTCAACTGCAAAATGTTTGGGCGCCCAGATTCTGATTACCTCAGATACAGATGGAGACCCCTCAACTGTGATCTCCCAAGGTTCAACGGGGAGGAGTTTCTGTTGCAAATGAGAGGCAAAACTGTGATGTTTGTGGGTGACTCACTGGGGCGCAATCAATGGCAGTCATTGATTTGCATGACATATACTGCAGTTCCTCAAACACAAACACAGTTGGTCAGAGGGGAACCGCTCTCAACCTTCAGATTCTTGGACTACGGTGTTACCATTTCATTTTACAGGGCTCCTTATTTGGTAGAGATTGATGTGGTCCAAGGGAAGAGAATTTTGAGGCTGGAGGAGGTTGATGGGAATGGTGACATATGGAAAAGTGCTGATGTACTTTCTTTTAACTCTGGACATTGGTGGGAGCATCAGGGGTCTCTTCAAGGGTGGGATTATATTGAATTAGGAAGCAAATACTACCCAGACATGGATCGTTTAGCAGCCTTCGAAAGGGGAATGAGAACATGGGCTAATTGGGTGAACAACAATATTGATAGAAGCAGAACCAAAGTATTCTTCCTGGGAGTTTCTCCTTCACATACCAACCCAAATGAATGGAATTCTGGAGTGACAGCAGGACTAGCTACAAAGAACTGTTATGGTGAAACTGCCCCAATTATTAGCACTGGCACAGCATACCCTGGTGTATACCCTGAACAGATGAGAGTTGTGGACATGGTGATTAGAGAAATGAACAACCCTGCTTTTCTTCTTGACATCACAATGCTATCAGCATTCAGGAAGGATGCACATCCCTCCATTTACAGTGGTGATTTGAACCCTCAACAGAGAGCTAACCCTGACTACTCTGCTGATTGTAGCCACTGGTGTCTTCCTGGATTGCCAGATACTTGGAATGAACTTTTCTACACTGCTTTGTTCTACTAA 4698 0.4187 MEGHDNDENRNLRRNISRKLDVNAKVEVSIRFDLVVGYPFEGWFGCHRKSGTPSASENLVNLKMLTVIMGERCGMECMGNRDVRKGIWKGVRSMEIGFQGSWHPGTVILCEDLQRRVRYDNILDDNGVDYLEEVVIVSKALDGDIEGANCYARGSIRPLPPLIELDKRDLIFGLCVDVNYAEAWWEGVIFDHCDGIDKRIVFFPDLGDEMQVGIHQLRITQDWDEIIEEWTRRGNWVFLDLIEEQKRKFFIAVSAKQIWYDLRSKEEFETIKEWTCNLKYLWTKLITKVVNHYLSLTLNEIISVGNHPGSLLKETSEEEFAEATANVDLSMILHDKEIVVQNEPVLPVKECVPEFQNKISRYGDSPFEENQEDRSSSHLTSTYWKPLNLSEVELCSDAVIEYPLASKRERPFWMDKLQKHLLCLGWKIEWSNRLNIKRYRYIAPPAQGQKCYFSLLQVCKAMKQDPNMNSLHLQNDRIIMHPTVDCHISDVPDNPAENIQNLDILPLAVPSSLVEVPANPAKNIQNLDIFPLAVPSSPVEDEVDDVPEYCPRAVVQYYRLYISNKSRAEKKQWIVKAKKHLLAEGWIFDYPPPSNKRRGIIYMSPQNRKFTTLHAACKFCIEESIPNWDLEWKAMDEGASSSKSTTNQKKKSKRDLKANLPPKFQSNGLPLQVLRSNKRVQKVSGPAHLHHKPLNIPSFLIDNGIIVPRSKVYYKTKGRHRTVRTLAEGKITGDGIKCNCCLAIYSFSAFENHASGSSTCRPSASIFLQDGKSLLDCQMQMMQSHRTREASGKSLSGMSLAENDYICSVCHYGGELVLCDKCPSSFHKTCLGLKDIPEGDWFCPSCRCGICGQRKMDGDEVEHFLPCIQCEHKYHVRCLKNGASDTSRHNGNWFCGIDCEKIYKGLHKLLGEPIPVPNNLTWTLVKFINPDNCDLVNIESDLLAESYSKLNLALSLMHECFEPLKESLTGRDLVEDAIFSRWSEIVILQDMVTMSELNRINFQGFYTVLLERNEELVSVATVRVHGKKVAEIPLVGTRLQYRRHGMCRILINELEKKLVQLGVERLVLPAVPSVLETWINSFGFTKMTNYERSQFLDYTFLDFEGAIMCRKLLMNIASSESLLLIGTSESGRCVDHSKSNPVFEVEEIDEEGAMDQRMEEFFVPRKRGNQPFWAVSICSHGASIVRCKLDSYTIDAYHRDNATTESLRHHRNTLHQQRPMIHANQTNCALFVGTWVEDDSYPLYQSSNCPIIDPQFNCKMFGRPDSDYLRYRWRPLNCDLPRFNGEEFLLQMRGKTVMFVGDSLGRNQWQSLICMTYTAVPQTQTQLVRGEPLSTFRFLDYGVTISFYRAPYLVEIDVVQGKRILRLEEVDGNGDIWKSADVLSFNSGHWWEHQGSLQGWDYIELGSKYYPDMDRLAAFERGMRTWANWVNNNIDRSRTKVFFLGVSPSHTNPNEWNSGVTAGLATKNCYGETAPIISTGTAYPGVYPEQMRVVDMVIREMNNPAFLLDITMLSAFRKDAHPSIYSGDLNPQQRANPDYSADCSHWCLPGLPDTWNELFYTALFY 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00104 1565 SMART ring_2 807 846 IPR001841 -
Spst6g00104 1565 SMART ring_2 848 898 IPR001841 -
Spst6g00104 1565 Pfam Tify domain binding domain 729 781 IPR032308 -
Spst6g00104 1565 ProSiteProfiles Zinc finger PHD-type profile. 804 849 IPR019787 -
Spst6g00104 1565 SMART agenet_At_2 168 225 IPR014002 -
Spst6g00104 1565 PANTHER PHD FINGER PROTEIN 12 548 1140 IPR042163 GO:0003714|GO:0045892
Spst6g00104 1565 Pfam Agenet domain 91 161 IPR008395 -
Spst6g00104 1565 Gene3D - 984 1112 - -
Spst6g00104 1565 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 1280 1561 IPR026057 GO:0016740
Spst6g00104 1565 MobiDBLite consensus disorder prediction 639 668 - -
Spst6g00104 1565 CDD Tudor_Agenet_AtDUF_rpt1_3 91 161 - -
Spst6g00104 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 849 902 IPR013083 -
Spst6g00104 1565 SMART PHD_3 848 900 IPR001965 -
Spst6g00104 1565 SMART PHD_3 806 847 IPR001965 -
Spst6g00104 1565 Pfam PMR5 N terminal Domain 1227 1279 IPR025846 -
Spst6g00104 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 798 848 IPR013083 -
Spst6g00104 1565 SUPERFAMILY FYVE/PHD zinc finger 784 847 IPR011011 -
Spst6g00104 1565 CDD PHD2_CHD_II 807 846 - -
Spst6g00104 1565 CDD NAT_SF 1008 1068 - -
Spst6g00104 1565 Pfam PHD-finger 806 848 IPR019787 -
Spst6g00104 1565 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 968 1102 IPR000182 GO:0016747
Spst6g00104 1565 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1003 1094 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00104 Spst-Chr6 1180254 1193534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00104 92 1056 PHD Transcription Factor Family AT5G58610 36.500 4.03e-179 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst6g00104 PC-Esterase 3.2e-92 CL0264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00104 - - gmx:100814680 1465.29