Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00093 ATGGTGGGTTTGAAAGGTGAGTGTGTGAGTGCGCGTGGTTATGATTGGGGGGCCACAGCACAGAAGAAAAGAGAGTGGTGGAGGCATCCATCATGGGCAAGAGTGAAAGAAGATATTTTTTGTTGCCACACACTGCTGAATCTCACACACCCTCACTCGCTTTCTGCAAAAAGGCAGACCAGAAGACAGAGGAAGATTGTTTCCAAGTTGGGTTCCACTCTTATCTTGTATTCTTTGGATTTTGAAAATTTTGGTGTCAACTTTTCCAAAGCTGACAAAATAAAATACAAGAGGAAGAAGCCCGTGACTCTCATTTTCCCTCTCAATGAAGAAGAAGAAACTCACACCTTCCCAATGACACCACCCTTCACTCTCTCCCTCTCCCTATTCGCCGTTTTCTCTATAACCGCCGTGCATGGGCTGGGCTCGGCCGCTACCATCGCTGTGACGTACGGCACCGCCACCGTGTGCGGCATCGTCGCCGGGGAGCCCCAACACCATATCCTGTGCTCCCGGGATGGCAGACGCGTCCACCTCACGCTCCCCAACGTCTCCTTCGAGGCCGTCTCTGGAGGTCGGAGCTTCTTTTGCGGCCTGCGCTCCGGCGGCCGGAGCCTCCACTGCTGGGACACCGCGGCCGCAGACGGTGCGTTCTACCCAAAGAGGGTCTTCCACAGCGACGTGGTGCATTTGGCTGACGTGGCAGTTGGTGATTCCCAGGTCTGCGCGAGGGAGGTGCCATCCGGTGTGGTGAGATGCTGGAGAGGAAACGGTGGGATCGAGTTTGTATCTCCCTCAGAGAGGTTAAGGTTTAAGAGTGTCACGTGTGGTCGCGGTTTTTCGTGTGGGATATTGAGAGAGAGTGGGAGGGTTGTGTGTTGGGGTGGTGGTGGTGACGACGAGGGTGCATATATCAGTGGTGAGATTCAAAGGAAGTTTGAGAATTTTACTATGTCGAGTTTTGTTGCTGGGGTGTCTCATGCGTGTGGTTTGACTCTTCGTGGGGTTTTGGTTTGTGGAGGGAACAATGGTTCGGGTCAACTTGGAAACAGTGTTTTTTTAAGTTCATTGCAGTTTTCAGGTCTTGCTTTGGGAGAGGGTTTCACGTGTGGCATTAGGCAGAGGAATGGGGTTGTTGTGTGTTGGGGTGGTGGTTTTGATAGTGATGTGGTGAAGGGTGTTCCTTTTGAGTCTATCGTTGCTGGTTTGGATTATGTTTGCGGGTTGACAACTAGGAATTTGTCTCTGGTTTGTTGGGGTGGTAGTTTTCATGTGCCTAGTGAGATTCCGTTGGGAGTGATTCTCCCAGGTCCTTGTGTTGAGGGTGGCTGTGGCAGTTCTTGTGGTACCTATCCTGATTCTGATGCTCTTTGTGATGGGTCAGGGAGTATTTGTTATGCTTGTCAAACTGAGGTTCCACTGGCTGTGCCATTGTTTCCACCACCATCATCACAAGTGTCTTCTTCACATGAAGGAAGAAACTTGAAGAAGTTTTTGGTGTTTTTGGTTGTTGGATCAGTTGGGGCTTTAGCCGGTGTATGTTCTATTGTTTTTTTCCTCTGGATTGGTGCAAGGAGGGTTTTGGTGAGGAGAGAAGTAGGTAATAGTTCTGTGAAGCCTACAAGCTCAGAGAGTGATGCCTACGTGGATATAATCCCCATGCCTAACGTTGGTTCCAATGGGGCAACCTTCAGAACTTTTTCTAGCAAAAGTCATGGGTCCAAAAGATTGAGGAGGCATAGGAGTGGTTCATCATCGAAGCATGTGGACAGGACTGAGAGTTTTTCATTGTGTGAACTGGCAACAGCCACTGACAATTTCTCATTGCGTAATAAGATTGGTGCTGGTAGCTTCGGCAGTGTTTACAAAGGCATGCTAGGGGATGGCCGTGAAGTTGCCATTAAAAGAGGAGATACTAGTACTATAAAGAAGAAATTTCAGGAGAAAGAAATTGCTTTTGATTCTGAATTGGCGATGCTTTCCCGGCTTCACCACAAGCATTTGGTGAGACTAATTGGGTTTTGTGAGGAGAATGATGAGAGGCTTTTGGTCTATGAGTACATGAGCAATGGCTCACTTTATGACCATTTGCATGACAAAAACAATGTCGAGAAGAGTAGCAGCATTTTGAATTCATGGAAGATGAGGATCAAGGTAGCATTGGGTGCCGCTAGGGGAATTGAGTACATTCACAACTACGCAGTGCCACCCATTATTCACAGGGATATCAAGTCATCAAATATACTTTTGGACTCAAACTGGAATGCCAGAGTTTCTGACTTTGGATTGTCACTAATTTGGCCCGAGACTGAGCAAGAACTGATGTCTACCAATGCAGTTGGAACCGTTGGTTACATAGACCCTGAGTACTATGTATTGAATGTGCTAACCACAAAGAGTGATGTGTATGGTTTAGGAGTGGTGATGTTGGAGCTTCTCACAGGAAAGAGAGCTGTGTTCAAAACTGAAGATGGGTCAAGCCCTATAGGGGTAGTGGAACACACAGGGCCAAAGATAGCATCAGGAGAGCTTTGGAGTGTGTTGGATTGCAGAGTTGGACAGCCAGAAGTGAATGAGGTTGAGTCCCTTGAGATCATGGCCTACACTGCTATGCACTGTGTGAACTTGGAGGGAAAGGAGAGGCCAGAAATGACTGACATAGTTGCTAACTTGGAGAGGGCATTGGCTTTCATTGAAGGTAGCCCTACCAGCATCTCCCTAGCTTCATTCTCTGCCCCACTTGAATGA 2748 0.4807 MVGLKGECVSARGYDWGATAQKKREWWRHPSWARVKEDIFCCHTLLNLTHPHSLSAKRQTRRQRKIVSKLGSTLILYSLDFENFGVNFSKADKIKYKRKKPVTLIFPLNEEEETHTFPMTPPFTLSLSLFAVFSITAVHGLGSAATIAVTYGTATVCGIVAGEPQHHILCSRDGRRVHLTLPNVSFEAVSGGRSFFCGLRSGGRSLHCWDTAAADGAFYPKRVFHSDVVHLADVAVGDSQVCAREVPSGVVRCWRGNGGIEFVSPSERLRFKSVTCGRGFSCGILRESGRVVCWGGGGDDEGAYISGEIQRKFENFTMSSFVAGVSHACGLTLRGVLVCGGNNGSGQLGNSVFLSSLQFSGLALGEGFTCGIRQRNGVVVCWGGGFDSDVVKGVPFESIVAGLDYVCGLTTRNLSLVCWGGSFHVPSEIPLGVILPGPCVEGGCGSSCGTYPDSDALCDGSGSICYACQTEVPLAVPLFPPPSSQVSSSHEGRNLKKFLVFLVVGSVGALAGVCSIVFFLWIGARRVLVRREVGNSSVKPTSSESDAYVDIIPMPNVGSNGATFRTFSSKSHGSKRLRRHRSGSSSKHVDRTESFSLCELATATDNFSLRNKIGAGSFGSVYKGMLGDGREVAIKRGDTSTIKKKFQEKEIAFDSELAMLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLYDHLHDKNNVEKSSSILNSWKMRIKVALGAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTNAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEDGSSPIGVVEHTGPKIASGELWSVLDCRVGQPEVNEVESLEIMAYTAMHCVNLEGKERPEMTDIVANLERALAFIEGSPTSISLASFSAPLE 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00093 915 SUPERFAMILY Protein kinase-like (PK-like) 584 891 IPR011009 -
Spst6g00093 915 MobiDBLite consensus disorder prediction 571 585 - -
Spst6g00093 915 FunFam receptor-like protein kinase FERONIA 569 687 - -
Spst6g00093 915 Pfam Protein kinase domain 609 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00093 915 Gene3D Transferase(Phosphotransferase) domain 1 688 899 - -
Spst6g00093 915 FunFam Serine/threonine-protein kinase-like protein CCR4 688 906 - -
Spst6g00093 915 SUPERFAMILY RCC1/BLIP-II 146 385 IPR009091 -
Spst6g00093 915 ProSiteProfiles Protein kinase domain profile. 607 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00093 915 ProSitePatterns Protein kinases ATP-binding region signature. 613 644 IPR017441 GO:0005524
Spst6g00093 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Spst6g00093 915 Pfam Regulator of chromosome condensation (RCC1) repeat 272 298 - -
Spst6g00093 915 CDD STKc_IRAK 613 893 - -
Spst6g00093 915 MobiDBLite consensus disorder prediction 568 588 - -
Spst6g00093 915 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 319 901 IPR044815 GO:0004674
Spst6g00093 915 Gene3D - 177 429 IPR009091 -
Spst6g00093 915 Gene3D Phosphorylase Kinase; domain 1 567 687 - -
Spst6g00093 915 SMART serkin_6 607 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00093 Spst-Chr6 1071181 1082378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00093 119 906 Receptor kinase-like Gene Family AT3G55950 50.611 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst6g00093 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00093 - - gmx:100776682 1326.23