Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00082 ATGCATGTGAATACAAGTGTGAATCCCCGAGTGCAAGTGATTGTAAAAATCTACAATGCTATCGCCCTGGTTGCAAAAAATATTGCATCAATGGATGCTGCCTTTGCAGCTGCTATGGCCTCAGTGAAACTGGAAATTGCCAATCTGCAGATGATTGCAGAAATTGCTCTGGTGATCGATTTGGTTGCACAAAGGATTGCTTTAATGGATGCTGCCATTGCAAATGTCGTCCACCAAGTGAAAAAATTGTTTCACTTCACATTCACTCTAATGGGGGTTTCATGGGAAGAAAGTGTCGCATATTCCATCAACGCAATCTACCTTCTCTTCTCAGCGTACCTTGTCTTTGTGATGCAAATTGGGTTTGCCATGATATGTGCAGGTTCGGTGCGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTCGGTTTTGCATTTGCATATGGCACTTCCAACCCTTTCATCGGCACTGATTTGTTTGCTCTAGCCCACATTCCCAATGCCACTTACGACTATGCTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTAACAGGCATCACAAGTGGCTCCATAGCTGAGAGAACCCAATTCAGTGCCTATCTTGTTTTCTCATTTTTCCTTAGCGGCTTTGTCTACCCAGTTGTGGTTCATTGGCTGTGGTCATCAAGTGGTTGGCTTAGTCCAAGTTCAACTCACTTGTTGTTGGGCTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAGTTGCCGGGCTTTGGGGGTCCATCATAGAAGGCCCACGGGCTGGCCGATTTGACGCCTTCGGCCGGCCCGTGACTCTGCGAGGCCATAGTGCACCACTTGTTGTGCTTGGAACTTTTTTGTTGTGGTTTGGTTGGTTCGGGTTCAATTCAGGATCGTTTGACAAGATCCTTGTGGCCTATCCAGGCACGTCGGACCAAGGTAATTGGACCTCGGTGGGTCGGACCGCCGTGACAACCACATTAGCCGGTTCGACTGCTGGGATAGTCACCTTGTTCGGCCGGCGGTTGCTGGTCGGCCACTGGGATGCAATGGATGTGTGCAATGGCTTGCTTGGTGGGTTTGTTGCCATCACCTCCGGATGCTCAGTTGTTGAGCCATGGGCTGCCATTCTTTGTGGGTTTGTATCGGCTTGGGTTTTGATTGGGCTGAACATTGTGGCCCTAAAACTGAACTATGATGATCCATTAGAGGCAGCCCAATTGCATGGGGGGTGTGGCACTTGGGGTTTGTTGTTTACTGGGTTGTTTGCGAAAGAGGAGTTTGTGATCCAAGTCTATAATTGTGGTGAGATAGGTGTCACAAGACCCTATGGTCTCCTACTTGGAGGTGGATGGGGATTGATTGGAGCCCAAGTGATTGAGATTTTGACAATCTTTGGATGGGTAAGTGTAACAATGGGTCCTATATTCTATGCCTTGCACAAACTTGAGATATTGAGAATTCCTTATGACGAGGAAGTTAATGGCCTTGACATTTCTAGTCATGGAGGCTATGCATATGCTCAAGAAAATAATTATCTAAGACTTCATGGAGATTATATGCCTATTCAACATAGCTTGTCTTAG 1653 0.4701 MHVNTSVNPRVQVIVKIYNAIALVAKNIASMDAAFAAAMASVKLEIANLQMIAEIALVIDLVAQRIALMDAAIANVVHQVKKLFHFTFTLMGVSWEESVAYSINAIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGTSNPFIGTDLFALAHIPNATYDYAFFLYQWAFAIAVTGITSGSIAERTQFSAYLVFSFFLSGFVYPVVVHWLWSSSGWLSPSSTHLLLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRAGRFDAFGRPVTLRGHSAPLVVLGTFLLWFGWFGFNSGSFDKILVAYPGTSDQGNWTSVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDAMDVCNGLLGGFVAITSGCSVVEPWAAILCGFVSAWVLIGLNIVALKLNYDDPLEAAQLHGGCGTWGLLFTGLFAKEEFVIQVYNCGEIGVTRPYGLLLGGGWGLIGAQVIEILTIFGWVSVTMGPIFYALHKLEILRIPYDEEVNGLDISSHGGYAYAQENNYLRLHGDYMPIQHSLS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00082 550 FunFam Ammonium transporter 88 540 - -
Spst6g00082 550 SUPERFAMILY Ammonium transporter 101 510 - -
Spst6g00082 550 NCBIfam ammonium transporter 104 529 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst6g00082 550 PANTHER AMMONIUM TRANSPORTER 98 525 - -
Spst6g00082 550 ProSitePatterns Ammonium transporters signature. 257 282 IPR018047 GO:0008519|GO:0016020|GO:0072488
Spst6g00082 550 Gene3D Ammonium transporter AmtB like domains 92 543 IPR029020 -
Spst6g00082 550 Pfam Ammonium Transporter Family 107 529 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00082 Spst-Chr6 984899 990975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00082 97 534 Inorganic Solute Cotransporters AT1G64780 65.618 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00082 K03320 - pvy:116129597 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00082 6 984899 990975 Spst6g00082 6 984899 990975 ECH