Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00079 ATGAAGAAAACATCAGGCCACAGTTTGCATCAGTCAAACCAAAGAAAAAGGAAAGTTGGTGTCCAAGATAGAAGTGCAGGCAATGGCACGCAGAGGCAGAGTGTTGAGAACCATACTGTGCTGAGATATTTCAATTCTGTCAAGAAAGTTTTTGCATCTTTTCTTTCTGGGAAAAGTAAATCAGCCTCAGAAGCCCCTCAAAGTGATGACGGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCCACAGATATATCGTCTGATAGTTCTAGGAGTTCATCAAAATTGGTATTATCTCATTCCTCTGCATCATCGGGCACTTCAAGCAGTCACCTTGGAATTGAGAACTTCACCTTTGAGAAAATTTACAAGGCAACAGCAAAGTTCTCTCCAGACAATAAGATTGGGGAAGGTGCGTTTGGAACAGTTTACAAGGGAAGGCTTTCTGATGGATCCCTTGTGGCTGTGAAGCGTGCCAAGAAGGATTTACAAAACAAAAACTTAGCTGAGTTCAAGAATGAAATAAACACATTGTCAAAAATTGAGCACAGAAACCTTGTAAGGTGGCGTGGGTATTTGGAGCATGGAGATGAAAAGATTATTGTTATTGAATATGTTAATAATGGAACCCTTCGACAACATTTAGATGGTCTTAGAGGAAATGGACTAGAAATTGGTGAGCGGCTGGACATAGCCATAGATATAGCGCATGGAATTACTTACCTTCACATGTACACAGATCATCCAATTATTCATAGGGACATCAAAGCATCAAATATCTTAATCACGGATAAGCTAAAGGCCAAAGTAGCAGACTTTGGTTTTGCTCGGTTGGGTGCAGAAGACCCTTCTGCAACCCATATTTCGACCCAAATCAAAGGAACAGCTGGTTACATAGATCCTGATTACATGCGAACACGACATTTATCCGAAAAGAGTGATGTATATTCCTTTGGTGTGTTGCTTGTTGAAATGATGACAGGACGACATCCAGTTGAACCAAAGAGACCTCCTAGTGAGAGAGTTACAATTGTATGGGCAATGCAGATGTTGAGACAAGGAGAAATTGTTATTGCCATGGATCCAAGGGTCAGGAGAAATCCAGCCTCTACAAAAGCAGTACAGAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCGGCTAGGCGGTCACGGCCATCCATGAAGAGTTGTGCAGAGGTTCTGTGGGCAATCCGCAAAGATTTTACAGATAAAACATCTTCTCATCCTCATCATGGTTCTCACCATTCTGCAGATTTCCCTCAAAGAGATACCAGGAGGAATAGGCATAAGACATATGGTATTGAAAATGGTAAAGGCTACAACAAGTTTATTGTTGAGGCTGGAAGGTGTGATTTGTTTGTAACCCAAATGGGTGAGATTGCGAAGTTAAGGGAAAACCAACAGCTTGAATTTAAGGGTACGCTAGTTTTGTCTTCTGTTTTGCGTTCATCTGTTGCATTGCATCGTTTGTATAACAGTTTGAGGTGTTTTTGTGTGGCTTTCTTCCCATTCTCACTCTGCGCTCTCTCTTACTCATCCTCTTCCCTGCGCTTCTCTGTTCGTGCCACTTCTTCTCGAGCAATGGCATCACATATTATTGGTTATCCACGCATGGGACCCAAGAGAGAGCTTAAGTTTGCCTTGGAATCATTTTGGGATGGAAAGAGTAGTGTCGAGGAGCTGCAGAAGGTTTCTGCGGACCTTAGGTCAGTCATCTGGCAGCATATGGCTGAAGCTGGAACAAAGTATATTCCAAGCAACACCTTCTCATACTACGATCAAGTATTGGACACAACGGCCATGCTTGGGGCAGTTCCTGCTAGATATAATTGGAATGGTGGGGAGATTGGGTTTGATGTTTACTTCTCAATGGCAAGAGGGAATGCATCCGTACCAGCTATGGAAATGACCAAGTGGTTTGACACCAACTACCATTATATTGTTCCTGAATTGGGTCCAGATGTTAAATTCTCCTATGCATCACACAAAGCTGTGGTTGAGTACAAAGAGGCCAAAGATTTGGGCATTGATACTGTACCTGTGCTTGTGGGACCTGTATCTTACTTGCTGCTGTCAAAACCAGCAAAGGGTGTGGAGAAGTCATTTTCCCTTCTTTCCCTAATTGACAAGATCCTTCCTGTCTACAGGGAGGTTGTGGCTGAACTGAAGGCAGCTGGTGCTACTTGGATCCAGTTTGATGAACCTACCCTTGTGAAGGATCTCGATGCCCACCAGTTACAAGCATTTACTCATGCCTATACAGAACTAGAATCAAGTTTATCTGGTTTGAATGTTCTGATTGAGACATACTTTGCTGATGTCCCTGCTGAGGCATACAAAACACTCACCTCTTTGAAGGCTGTTACTGCGTATGGGTTTGACATTGTTCGTGGAACAAAGACCCTTGATTTGATCAAGCAAGGATTTCCATCTGGAAAATTTCTTTTTGCTGGTGTTGTTGATGGAAGAAATATTTGGGCCAATAATCTTGCATCATCTCTGAACACCTTGCAAGAACTTGGGGACATTGTTGGGAATGACAAGGTTGTGGTTTCCACATCCTGTTCTCTTCTTCACACTGCAGTGGATCTTGTGAACGAGACCAAGTTGGACCAAGAGATAAAATCTTGGCTTGCATTTGCGGCACAAAAAGTTGTTGAAGTAAATGCCTTGGCCAAGGCATTGTCTGGACAGAAGGATGAGGTTTACTTTTCTGCTAATGCTGCAGCCTTGGCTTCAAGGAAGTCCTCCCCAAGGGTGACAAATGAGGCTGTCCAAAAGGCCGCTGCAGCTCTAAAGGGCTCCGATCATCGCAGGGTCACAAATGTTAGTGCCAGGTTGGATGCTCAACAGAAGAAACTGAATCTTCCTATTCTTCCAACCACTACAATTGGATCTTTCCCTCAGACTGCAGATCTTAGAAGAGTTCGCCGTGAATTCAAGGCTAACAAGATCTCTGAGGAAGAATATATCCGTTTCATTAAGGAGGAAATTAACAATGTTGTGAAGCTCCAGGAAGAACTTGACATTAGTGTCTTGGTGCATGGAGAGCCTGAGAGGAATGACATGGTTGAGTACTTTGGAGAGCAATTGTCTGGCTTTGCTTTTACTGCCAATGGGTGGGTGCAATCATATGGATCCCGATGTGTCAAACCTCCCATCATTTATGGTGATGTGAGCCGTCCCAAGCCCATGACTGTCTTCTGGTCTTCAACTGCTCAAAGTTTGACCAAACGACCTATGAAAGGAATGCTTACTGGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAGCCAAGATTTGAAACATGCTACCAGATAGCTTTGGCTATCAAGGATGAGGTTGAGGATCTTGAGAAAGCTGGTATTACTGTCATCCAGATTGATGAGGCTGCTCTAAGAGAAGGTTTACCTCTTAGGAAGTCTGAGGAGGCTTTCTATCTAAACTGGGCAGTTCACTCATTTAGGATTACCAATTGTGGTGTGAAAGACACCACTCAGATTCACACTCATATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCGTAGACATGGACGCTGATGTGATCACCATTGAGAACTCCAGATCAGATGAGAAGTTACTTTCAGTCTTCCGCGAGGGAGTGAAATATGGTGCTGGCATTGGTCCAGGCGTTTATGATATTCACTCACCCAGGATTCCACCCACCGATGAAATTGCTGACAGGATCAACAAGATGCTTGCAGTTCTTGAAAGCAACATTCTCTGGGTCAACCCAGATTGTGGCCTTAAGACACGCAAGTACACTGAGGTCAAACCTGCTCTTACCAATATGGTTGCTGCTGCCAAACTTATTCGCGACCAGTTAGCTAGTGCCAAGTGA 3906 0.4357 MKKTSGHSLHQSNQRKRKVGVQDRSAGNGTQRQSVENHTVLRYFNSVKKVFASFLSGKSKSASEAPQSDDGKNTHKVRGVSSSTDISSDSSRSSSKLVLSHSSASSGTSSSHLGIENFTFEKIYKATAKFSPDNKIGEGAFGTVYKGRLSDGSLVAVKRAKKDLQNKNLAEFKNEINTLSKIEHRNLVRWRGYLEHGDEKIIVIEYVNNGTLRQHLDGLRGNGLEIGERLDIAIDIAHGITYLHMYTDHPIIHRDIKASNILITDKLKAKVADFGFARLGAEDPSATHISTQIKGTAGYIDPDYMRTRHLSEKSDVYSFGVLLVEMMTGRHPVEPKRPPSERVTIVWAMQMLRQGEIVIAMDPRVRRNPASTKAVQKVLKLAFQCLAPARRSRPSMKSCAEVLWAIRKDFTDKTSSHPHHGSHHSADFPQRDTRRNRHKTYGIENGKGYNKFIVEAGRCDLFVTQMGEIAKLRENQQLEFKGTLVLSSVLRSSVALHRLYNSLRCFCVAFFPFSLCALSYSSSSLRFSVRATSSRAMASHIIGYPRMGPKRELKFALESFWDGKSSVEELQKVSADLRSVIWQHMAEAGTKYIPSNTFSYYDQVLDTTAMLGAVPARYNWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPDVKFSYASHKAVVEYKEAKDLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKILPVYREVVAELKAAGATWIQFDEPTLVKDLDAHQLQAFTHAYTELESSLSGLNVLIETYFADVPAEAYKTLTSLKAVTAYGFDIVRGTKTLDLIKQGFPSGKFLFAGVVDGRNIWANNLASSLNTLQELGDIVGNDKVVVSTSCSLLHTAVDLVNETKLDQEIKSWLAFAAQKVVEVNALAKALSGQKDEVYFSANAAALASRKSSPRVTNEAVQKAAAALKGSDHRRVTNVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREFKANKISEEEYIRFIKEEINNVVKLQEELDISVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSLTKRPMKGMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEEAFYLNWAVHSFRITNCGVKDTTQIHTHMCYSNFNDIIHSIVDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLESNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRDQLASAK 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00079 1301 Gene3D - 541 1061 IPR038071 -
Spst6g00079 1301 SUPERFAMILY UROD/MetE-like 539 931 IPR038071 -
Spst6g00079 1301 Gene3D Transferase(Phosphotransferase) domain 1 207 426 - -
Spst6g00079 1301 Pfam Protein tyrosine and serine/threonine kinase 133 402 IPR001245 GO:0004672|GO:0006468
Spst6g00079 1301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Spst6g00079 1301 ProSitePatterns Protein kinases ATP-binding region signature. 136 162 IPR017441 GO:0005524
Spst6g00079 1301 MobiDBLite consensus disorder prediction 60 94 - -
Spst6g00079 1301 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 537 1301 - -
Spst6g00079 1301 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 931 1294 - -
Spst6g00079 1301 Pfam Cobalamin-independent synthase, N-terminal domain 539 851 IPR013215 GO:0003871|GO:0008270|GO:0008652
Spst6g00079 1301 SUPERFAMILY Protein kinase-like (PK-like) 107 406 IPR011009 -
Spst6g00079 1301 Pfam Cobalamin-independent synthase, Catalytic domain 968 1291 IPR002629 GO:0003871|GO:0008270|GO:0009086
Spst6g00079 1301 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 94 206 - -
Spst6g00079 1301 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 537 1296 IPR006276 GO:0003871|GO:0008270|GO:0009086
Spst6g00079 1301 CDD CIMS_N_terminal_like 539 903 - -
Spst6g00079 1301 SUPERFAMILY UROD/MetE-like 933 1295 IPR038071 -
Spst6g00079 1301 MobiDBLite consensus disorder prediction 77 94 - -
Spst6g00079 1301 ProSiteProfiles Protein kinase domain profile. 130 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00079 1301 Gene3D Phosphorylase Kinase; domain 1 90 206 - -
Spst6g00079 1301 SMART serkin_6 130 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00079 1301 Gene3D - 926 1294 IPR038071 -
Spst6g00079 1301 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 541 930 - -
Spst6g00079 1301 MobiDBLite consensus disorder prediction 24 39 - -
Spst6g00079 1301 MobiDBLite consensus disorder prediction 1 39 - -
Spst6g00079 1301 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 207 417 - -
Spst6g00079 1301 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 542 1296 IPR006276 GO:0003871|GO:0008270|GO:0009086
Spst6g00079 1301 CDD CIMS_C_terminal_like 969 1292 IPR002629 GO:0003871|GO:0008270|GO:0009086
Spst6g00079 1301 CDD STKc_IRAK 136 403 - -
Spst6g00079 1301 MobiDBLite consensus disorder prediction 414 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00079 Spst-Chr6 959945 970104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00079 120 407 Receptor kinase-like Gene Family AT3G46290 41.869 1.58e-61 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Spst6g00079 Meth_synt_2 3.5e-155 CL0160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00079 K00549 - gmx:100779947 1490.71