Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00049 ATGAAAGGGCTCTCTAAAGGTTATCTCAGAATAAGAAAAGATAACATGGAGAAAGCGCGTGGGAGAGTGAAAATAGAAGGAGAGTTTGAACGTTACCTTTATGATTATCTTGTCAAACGCAACATGCACCGCACTGCTGAGGTTTTCAGGAACGAGGCTAATCTTCAGTTGAATCCCGCTGCTTCTTCAAGTGATGCTGTGGATGTCCCGGAAGGATTCTTGCTGGAGTGGTGGTCACTTAACAATGATTTTGACTTCTTTAGACAAATGCATGACACACATGGGTTACAAGGAATGCAGGGATGTAATAATGCTTTTCAAGATGTAGGGTGTTCCATGAATGTAGAAGGAATGTATCAATTGCCTCATAATTTTACTCCTGTTCAAGCACTCAACATTGGAAGCAACTTAATGCCCTCACATGTAACTGGTGAATTGCCATTATTTTCCTTACCATCTGCACTCCAACAAGTAAATGGTGAACAGTCACAATTTTTATTACCATTTTCCCATCAAGACGTATGTGATGAATTGCAACAACTTCCATCTTCACATCATGCTCCAATGCCAACACCGGCAGAGAGAACAATCGAGGTTTCGAATGTCAAAGGTCCAGAAGCAAAGTCTGAATATACTGGATCTATTGAGGAAACAGATCCGATAATTGAGAATTTGTTGAATTCTTTTTGGTTGTTCGAACAAGATCAACCAAATTTATTTGAGAAGTCAACGGTGGGAGAGAGCAGCAGAAATGTGGAGAATTTGCAGGAATGTGATGGAAACACTGGTGTGAATGCAATTGCTGGTTCACGATCAGCATTGGAGGATGATGATAACAGAAGTAACACAAGTGATTGTTCCAGCGATTACCAAATAACTATTACTGATGCAGATGCTTCAACGGTGCGTGTGAACTTTGTCTATTGTACCTTATTCCTATTTCGTTCTAATTATGGAAAATTTGGCTTGCAGGCCATCAGTTGGAATCCAATGAAGAAGCATAAATCAGTATCTTCAAGTATGGAATGTGATATGTTGTCTGCAATAATGAATTACCTTCTTCTCTTCAACTACGAAGATCAACTACGGCTAATAACCTTGCGAATCAATCAAGCATTTGTGTTCACTGCAGCACTTGGAGATCCTTCAAAACATGGTTTAGAAGCCACTCTAAATCGTAATGCTTCTCAAGAAGCAGGGTGTTCCATGAATGAAGAAGCAAAAAGTCAGTTGTTTGATGATTTTACTCCAGGTTTTGATTCTGGAACATTTGCATTGGCTACATTGACTGTTCTCTGTGCAGATGTTAACATTGCTTCTTGA 1323 0.3961 MKGLSKGYLRIRKDNMEKARGRVKIEGEFERYLYDYLVKRNMHRTAEVFRNEANLQLNPAASSSDAVDVPEGFLLEWWSLNNDFDFFRQMHDTHGLQGMQGCNNAFQDVGCSMNVEGMYQLPHNFTPVQALNIGSNLMPSHVTGELPLFSLPSALQQVNGEQSQFLLPFSHQDVCDELQQLPSSHHAPMPTPAERTIEVSNVKGPEAKSEYTGSIEETDPIIENLLNSFWLFEQDQPNLFEKSTVGESSRNVENLQECDGNTGVNAIAGSRSALEDDDNRSNTSDCSSDYQITITDADASTVRVNFVYCTLFLFRSNYGKFGLQAISWNPMKKHKSVSSSMECDMLSAIMNYLLLFNYEDQLRLITLRINQAFVFTAALGDPSKHGLEATLNRNASQEAGCSMNEEAKSQLFDDFTPGFDSGTFALATLTVLCADVNIAS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00049 440 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 29 203 IPR044716 GO:0003714
Spst6g00049 440 Pfam LisH 33 53 IPR006594 GO:0005515
Spst6g00049 440 ProSiteProfiles LIS1 homology (LisH) motif profile. 31 57 IPR006594 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Spst6g00049 LisH 4.8e-05 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00049 - - vra:106776158 330.102