Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00018 ATGAAGGAAGATGGCAATTGGCATCCAGAAGAGGGTCAGAGTGGAAACAATTCAAATGACGATGAATCTCCAGATATTTCTAAATGGGAATCAATAATATGGCTTTCCGTTATGACTGCTTGGATATCAATCCTGTCAGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATTAGTGTTATATTGCTTCCACTAGTGGGTAATGCAGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGGGTTGCAATAGGGTCATCCACGCAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAACCGGGCACCCTATGGACTTAAACTTTCAACTTTTTGAAACGGCAGCACTATTTCTTACTGTTGTAGTGGTAGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATTGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 546 0.3956 MKEDGNWHPEEGQSGNNSNDDESPDISKWESIIWLSVMTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWITGHPMDLNFQLFETAALFLTVVVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00018 181 Gene3D - 18 175 IPR044880 -
Spst6g00018 181 FunFam Vacuolar cation/proton exchanger 19 175 - -
Spst6g00018 181 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 15 178 IPR004713 GO:0006812|GO:0008324|GO:0016020
Spst6g00018 181 Pfam Sodium/calcium exchanger protein 32 172 IPR004837 GO:0016020|GO:0055085
Spst6g00018 181 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00018 Spst-Chr6 468956 476368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00018 10 181 Antiporters AT1G55730 76.163 2.80e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00018 K07300 - gmx:100799276 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00018 6 468956 476368 Spst6g00018 6 468956 476368 ECH