Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00017 ATGCACAAGTCCGATGATGAAATTCCTTTTGACACTGAAATAAATTTTCACCAGTCAGAATCTAGTCTGGTGGAGGCACGCCAATCACATTCTGGAGAATCTCGGACTGGTTGTCATGAATCGTTGGCGGGTATTGTTTACAGGAGCATACAAGTTGTGATTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTGTTGCAATTCTTGTGCAGAAGTTTTCTGGTCATCTTGGTTGGGTCTTTGCTATGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACACTGGAGATACTGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTGATCATCTCAATATACGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTCTCTTTGCTGGGATCAATTTTGTCCAATATGTTACTGGTGCTTGGATGTGCATTCTTATGTGGTGGGCTTGTTAATCATAAGAAGGAACAAGTGTTTAACAAGGCAACTGCTTCTGTGAACTCAGGATTATTGCTGATGGCAGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACACACACTGAGGTTCATGTTGGGAAGTCAGAATTGTCACTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCTTATGCTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCTGCAAACGAGGTTGCAAGTCTTGTACCATGCTTCCCTTTTGTTTCTCACTCGTTCTTTTGTTTGTGGATATGTGGTATGGCAAGCGATATCATTGATTTGCTTGCTCTTGAGTGTATGTAA 855 0.4211 MHKSDDEIPFDTEINFHQSESSLVEARQSHSGESRTGCHESLAGIVYRSIQVVIFSNKLNLLMPFGPVAILVQKFSGHLGWVFAMSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGLVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELSLSRFSSCVMLVAYAAYLFFQLKSQRSLYVSANEVASLVPCFPFVSHSFFCLWICGMASDIIDLLALECM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00017 284 FunFam Vacuolar cation/proton exchanger 110 249 - -
Spst6g00017 284 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 15 247 IPR004713 GO:0006812|GO:0008324|GO:0016020
Spst6g00017 284 Gene3D - 108 280 IPR044880 -
Spst6g00017 284 Pfam Sodium/calcium exchanger protein 79 236 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00017 Spst-Chr6 467104 468523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00017 17 248 Antiporters AT1G55730 69.828 9.30e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00017 K07300 - gmx:100799276 440.654