Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00009 ATGAAGCATGCCACAATATTGGCTATATCAGCATCAGGGTCACATAAAGTTAAATATCACAAGACCAAGCCCGGAGAGTTTTTGTTGGAGGGTATTTTGGATTGCATCCATGAAATCACCACAGCACTTGCTTTTGCTGATAGGATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTCGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCAGTGGAGAAAAACAGGCTTTTTTTTGTTAAATTGTTCCCAGAAATATCCAATCTTACAAGAGACAACCCTCCAATTGCATCTTTCATCATTCGGGTTGTTAGTTCTGTTGGAGATCGCAAGGCCATCACACATCCAGAAATAAAGGACAAATTGTTAAAGAACAACGACGATTTTATTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATTGACGTTGAGTTTCTGGATTTGAAGACTGCATCGCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGGTTTACTCAGCTAAGATCAAATGCAAATGCCATTGAATCTCTTGGTAGAATGCTAACAGAAGGAATTCACACTGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCACAGAGCTGTTCTTGCTGCCAGATCACCTGTATTCCGCAGCATGTTTTCACATAATCTTCAGGAGAAAGAGTTGTCAACCATAAACATCTCAGACATGTCACTCGAATCATGCCAGGCTTTTCTCAATTATCTCTATGGAATCATCAAACATGAAGAGTTCATGATTCATAGGTTGGCCCTTCTTCATGCAGCTGACAAGTATGACATATCAGATTTAAGAGATGCGTGCCATGAGAGTCTTCTTGAAGACATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCAGTTGATGAAACTGAAGATGAGTTGCATCCGGTATCTTGTGAAGTTTGGCAAAATATATGAAATTCGGGATGATTTCAATACCTTCTTGCATAACGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGA 1131 0.4076 MKHATILAISASGSHKVKYHKTKPGEFLLEGILDCIHEITTALAFADRMSDSAYRVETTPRLAQWRIENSASCTYRKSDPFKIGKWNWHLSVEKNRLFFVKLFPEISNLTRDNPPIASFIIRVVSSVGDRKAITHPEIKDKLLKNNDDFIWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQLRSNANAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLESCQAFLNYLYGIIKHEEFMIHRLALLHAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLHNADRDLIAEVFHEVLDAWKGF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00009 376 Gene3D Potassium Channel Kv1.1; Chain A 190 339 IPR011333 -
Spst6g00009 376 SMART BTB_4 211 309 IPR000210 GO:0005515
Spst6g00009 376 CDD BTB_POZ_ZBTB_KLHL-like 210 292 - -
Spst6g00009 376 SUPERFAMILY POZ domain 196 307 IPR011333 -
Spst6g00009 376 ProSiteProfiles BTB domain profile. 211 270 IPR000210 GO:0005515
Spst6g00009 376 PANTHER OS08G0495500 PROTEIN-RELATED 53 375 IPR044714 -
Spst6g00009 376 Pfam BTB/POZ domain 204 307 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00009 Spst-Chr6 380367 383484 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst6g00009 BTB 1.8e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00009 K10523 - gmx:100790186 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00009 6 380367 383484 Spst6g00009 6 380367 383484 ECH
Spst6g00009 6 380367 383484 Spst8g00087 8 669336 675038 PCT