Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00004 ATGCCTCAAGAGAGTTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTGAGCATGAAGGAGGCTTCATGCACTGCCACACAGGAAGGTTTCAATGATAATGAATTGGCTCAAAGGAAGGCAGAGGAAGCAGCTTGGAGAAGGCACAAAGCGACGGAATGGCTACGCGAAATGGACTATGTTGCATCATCATCACTCTCTGCATCACCCTCCGAAGAAGAATTCTGCCTCGCTCTTCGCAATGGCCTCATCCTCTGCAATGTCCTCAACAAAGTCAACCCTGGTGCTGTTCTCAAGGTGGTGGAGAATCCTGGGCTTTCTGTTCAATGTACAGAGGGTGCGGCCCACTCAGCAATTCAGTATTTTGAGAACATGAGGAATTTCTTAGAGGCTGTTAAGGATATGCAGCTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCCAATAAAGTTGTAGATTGCATTTTATGTTTGAAGGGATTTTATGAATGGAAGTTATCCGGTGGGATTGGTGTGTGGAGGTACGGTGGAGCTGTGAGAATCACTTCATTTCCAAAGAAGTCTCCTTCCTCCATAGTTGGTAGTGAAAGTGTCGATGAATCACTGGACGAGTCAGAATCATCACAGTATGAACAATTATTAGAATTTCTTCAACTATCTGAAGAGTTCTTAATTGAAGAAACTAGAACTGTCAATGCTCTAGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGACCAATGGGATTGAAGATCTGCCTTTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTAAAGAATTTCTCATCTTTGCTTGTTTCTCAAAGCACTCAGCTTGGACTTTTCTTGAAGAAAATATTAAAAGATGACATGGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTGAATCAAAGAAGTAGCTTAGCGTCAAATGACTTCTCCAAATTCTGCAATTGTGGTGGAAAACATGATAATATTCGACAAAATGCTAATTATTATGCAAAGTATACTGAAGTAATCAATACACAACAAAAACAACTTGAGGATCATATCAAAAGCCTTAAAGTGGCCTCTACTTCCTACCACAAAGTTTTGGAGGAGAATCGTCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTTTATTGTAGAGTGAGACCATTCTTACCAAGGCAATCAAATGGGCAATCTACGATTGATTACATTGGAGAAAATGGAGATATGATGATCATAAATCCCCTTAAGCATGGAAAAGATGCTAGACGAGTATTTTCATTCAATAAGGTGTTTAAAACAACTGTAACACAAGAACAAATTTATGCTGACACTCAACCCTTGATTAGATCCGTTCTAGATGGTTATAATGTGTGCATCTTTGCATATGGACAAACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTTACAACAGAAGAGACATGGGGTGTAAACTACAGGGCTTTGGGTGACTTATTTTATATATCAAAGGAAAGTTATTTCATTACCTTAACAAGGTATACATTAGACATACGAAGCAATTCTCAAATGAATGGTATCAATGTGCCTGATGCATTTTTAGTTCCAGTTACCTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTAAAAAAAATCGTGTCGTTGGTGCTACAACTTTAAATGAGAGAAGCAGTCGATCTCATAGTGTTTTGACGGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGTTGTCTGCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCAGTTGGTGAGAGACTAAAGGAAGCTCAACATATAAATAGATCACTTTCTGCACTTGGTGATGTTATCTCTGCCTTGGCACAAAAGAGTCCACATATCCCCTACAGAAATAGCAAGCTTACACAAGTATTACAAGATTCTTTAGGAGGACATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTCAATGCTTTTGGAGAGACAATTAGCACACTCAAATTTGCTGAGAGGGTTTCATCCATTGAACTTGGGGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCGAGAACTAAAGGAAGAGATATCAAATCTCAAATTGGCATTGAAGAGGAAGGAAGCAGAACTGGATCAGTGGAAGGCTGGGAGTGCTAGAAGCACCACCACTGATTCTCAAAAACCAAGAACTGTCTCACCTTTTCAAATACTTAAATATGGTACTGGTATCAACACAAAGCATGAAACTAGTCAAAGACTCATGGAGGATAGAAGCTTTGAGTCTAGAAGTTGCTCTTCAGGTAAGCAAAGAAGGTCAAGGTTTCCCTCTACCTCTATGGACAAGGACTCTATGCCAAAAATGTCTTTTCTGGGTGAAGAAAAGTTAATGAGCTCAGGGAAAGGAAGATCACCATCTCCTCCGGTGAGAAGATCACAATCCAATGATAGAGGGACAATCATTAAAAGCAAGGTCAAAACTGAAACAATAGACAACCAACCAATATTAAAACATCCATTTCCAGCGGCTAACAAATCCCTTGTAACAATGTCAGTGGTTGCATGCACTGACAATAACACAAGAATGTATGCGAATTCACAAGAGATAGTAAAGCATGAAAACATTTCGGAAACAATCTTCAACCTCCAAAAGCTCAACTATAAGAAAGTTCATCAAGAACATGAAGAGGAACAATTCAAGCAAGTACTTAGCGCAGTAAGACAAGGTGGTATTAGAAAAAACAAGGTTGAGAGTAAGGCTAAGGCCAAGCATAATCAACTATCATCTTTTACGATTCAAAAGCCTGATACGACCTCCCCATTTATTCCTGACATGGAATTTGCTGGTGAAACTAATGTGGAGCTAACTCCAAAGAATAATTCCTCCGAGATCGAAAATGATCTTCGATTGATGAAGTCTACTATCTATGATGCTTTAAGTCTCAAAAAGATAAGTCAGAACTTTGTGAGGGATTTTCAGAGCTTTGAATCAAGAGGAGAACCTTTATTGGTTAGCAAAGTTGAAACCGAAGTTTTGAATGGTTCAGGTAATCATCTTAAAGAAGGAAGCAATGCATCAACGCCTGAACTTAGAAGAAGCCGATCTACCCCACGTGGAAAGTTTTTTGTTGGCTATATCGCTGAGGAAGTGTAA 3252 0.3954 MPQESSQNSFFTSPSKRGLKGLVSMKEASCTATQEGFNDNELAQRKAEEAAWRRHKATEWLREMDYVASSSLSASPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVENPGLSVQCTEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGIGVWRYGGAVRITSFPKKSPSSIVGSESVDESLDESESSQYEQLLEFLQLSEEFLIEETRTVNALAFLYDHFGLRLLQAYLRETNGIEDLPLNAMVIDTLLSKVVKNFSSLLVSQSTQLGLFLKKILKDDMGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKHDNIRQNANYYAKYTEVINTQQKQLEDHIKSLKVASTSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPRQSNGQSTIDYIGENGDMMIINPLKHGKDARRVFSFNKVFKTTVTQEQIYADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALGDLFYISKESYFITLTRYTLDIRSNSQMNGINVPDAFLVPVTCTQDVLDLMRIGKKNRVVGATTLNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAFGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISNLKLALKRKEAELDQWKAGSARSTTTDSQKPRTVSPFQILKYGTGINTKHETSQRLMEDRSFESRSCSSGKQRRSRFPSTSMDKDSMPKMSFLGEEKLMSSGKGRSPSPPVRRSQSNDRGTIIKSKVKTETIDNQPILKHPFPAANKSLVTMSVVACTDNNTRMYANSQEIVKHENISETIFNLQKLNYKKVHQEHEEEQFKQVLSAVRQGGIRKNKVESKAKAKHNQLSSFTIQKPDTTSPFIPDMEFAGETNVELTPKNNSSEIENDLRLMKSTIYDALSLKKISQNFVRDFQSFESRGEPLLVSKVETEVLNGSGNHLKEGSNASTPELRRSRSTPRGKFFVGYIAEEV 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00004 1083 SUPERFAMILY Calponin-homology domain, CH-domain 54 191 IPR036872 -
Spst6g00004 1083 MobiDBLite consensus disorder prediction 776 851 - -
Spst6g00004 1083 Coils Coil 716 750 - -
Spst6g00004 1083 MobiDBLite consensus disorder prediction 1047 1068 - -
Spst6g00004 1083 Pfam Kinesin motor domain 535 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 Pfam Calponin homology (CH) domain 53 172 IPR001715 GO:0005515
Spst6g00004 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 746 IPR027417 -
Spst6g00004 1083 Gene3D - 43 171 IPR036872 -
Spst6g00004 1083 ProSiteProfiles Calponin homology (CH) domain profile. 51 172 IPR001715 GO:0005515
Spst6g00004 1083 MobiDBLite consensus disorder prediction 1047 1065 - -
Spst6g00004 1083 FunFam Kinesin-related protein3 546 751 - -
Spst6g00004 1083 Gene3D Kinesin motor domain 377 531 IPR036961 -
Spst6g00004 1083 Pfam Microtubule binding 390 521 IPR031852 GO:0008017
Spst6g00004 1083 PRINTS Kinesin heavy chain signature 659 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 PRINTS Kinesin heavy chain signature 479 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 SMART ch_5 53 170 IPR001715 GO:0005515
Spst6g00004 1083 FunFam kinesin-like protein KIN-14F 43 172 - -
Spst6g00004 1083 PANTHER KINESIN-LIKE PROTEIN KLP-3 58 868 IPR027640 GO:0003777|GO:0007018
Spst6g00004 1083 ProSiteProfiles Kinesin motor domain profile. 404 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 SMART kinesin_4 402 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g00004 1083 MobiDBLite consensus disorder prediction 783 801 - -
Spst6g00004 1083 MobiDBLite consensus disorder prediction 802 817 - -
Spst6g00004 1083 Gene3D Kinesin motor domain 532 750 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00004 Spst-Chr6 294230 308661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00004 395 709 Calmodulin-binding Proteins AT5G65930 40.988 1.57e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00004 K10406 - gmx:100793458 1728.76