Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02159 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAACATGAAGCTATCTTCATCTCAGCACCAAGATGGCAAAAGTAGAGGGGCTGATATGAAGAAGAAAATGAAAAAATCAAGGTCAATAAAGCTTTCTGATCTTGAGGCTCTTCAGTCATCATCATCACCTTCGAGGAGAAGCTTCCCTCAACCAGCAAAGCCACCCCCTCTTCACACTCCAACGACTTCAGCATCACCGCAGAAGCAGCAACCTTTGTTCAGAACAACAGATGGTTCACCCAATTACATGAAGCCAACAAGCAGTTCACATGCAAAAAAGGAACTTTTTCCGGTAAGCCTCAGGAACACTCAATCTGGTTCTGATTTTAAGAATCTTCCAAGCAAATTTTCCAGTGATTCCAAAGCTGCCTGTGCTAAAAAACCTGCCAAAGCCTTGACAAGATCATCTAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTAGTTTCAAGGCTTCTAGAGCTTGTTCTAGAAAATCCACCAGGGCCGCTATGTGTGCAGATATGACTGCACCACAAAGAGCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTTCATATCTCATGCTTAGCCCTGGGGGAACTGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATACTGTTCTCTTAATGGTCATCATCACGTTGATTTGCCACCATTGAAGAGCTTCATGTCAGCTAGGAGACGCCTTTTGAAGACGCAGAAACGCGCCAAGCTTGAAGCTCTCAGCCCTAGGAGACTGAATGTTCCTCTTGAGACAGATAAGAAGGACTCTGATGTTGAGAAGAATTGTTTTAAGAAAAAATCTATTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAATAAAAATGATGCAGAACCTACAGGAGTAGAAGAAATGGGGAGAACAGATTTTCTCGAAGAGATTGAGGATCAAGAAGATAACAAGTCATCAATTGAAGCTAATGGTATTGCAGCTAGCGAGGAGGGTGTCATGCAAGTCAATACTCCAAGAATTATTGGTATTCTTTCTCCCTCTGTATGTGAAATTGATCTTGAGGAGGATTTGAAAAAATCCTTTGATGATGTTGCAATTGAAGTAGATACCAACGGAAGCTTTCTCCGAGAACAAAATTCAGAAGATGCAGATGAAAATCGCCAGCCTATTGTCTGGGCTTATGAAGAAATGAGTATGGGAAGCTACTGCAGCGATGGGGAACAAGACATGGGTGATGTTGACATGGTTGATTCTGATTCCAAAACCTATGAAATGGAGTGGAAGGAGGAGCGATTTTGCGGATTCGATCACGAAGAGGATGCTGATTCTTCCGTGTACACAGAAGAGGACAATGACTCAAAAGTTGAGTCATCATCAGAGAGTTCTCATGATGTGTCAGTGACTTGGTTGGATGATATCCTTGGTAACTATTATGAGGTCTTTCTTGTCGATGAAACTCACAAAGAACCCAATTCAGGAGAAAGCAACCATTTTGAAGAAGAACATCATGGCATCAGTTCTGTCCCTGAAGACACAAATGGAAGCATTGAAACTCAAGAAATTGAGTACTCGTCAACAGGTATGGGTTGTGACCAATCTTCATTTACAGAGGAAATATTTGAGTATATGACAAATGCACAAGATAAAGGTGGAGAAGATGAGAAACATGTGGATGATGGGGCCAGTTGCAACACACAGACACTTGATGAAGAGACAATTGACAAGACTCAATGTCAGAAGATGAGAGAAACTAGCACAATTGATGAGACAAGTGAAGATGGATGCTCAAGCAGCCTAGAGAATAATGATGAGAGCAATAAAAGAGAGAGCCAAATTGAGTTGGTGGATGTGTCTGAAGAAAGTTGTATAGCTGAACAAGATCAGGATTTGTTGGAAAAAGATCAAGGCAAAGGTAGAAGGTTCGAAAGCACAAATTGCATAGGTGGTGAAGAGGAAAGCACAAGCAAGAATAGTAAAGGTGCAATTAGGAGAAAGAGGGGTGTTGAAGATGATGATGAAATGAGAAAGTTCAACCCCAAAGAGCCAAACTTCCTGGCCTTGGTTCCTGAACCAGAACAAGAAAAGGTTGATCTGAGGCATCAAATGATGGACGAGAGAAAGAATTCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGCTGTGACAAAACTTGCACCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTGATGCCAGCACCCAAATGTGAAAACCGTGTGAGAAACAGTTCAGCATTTGGTCATGCAGGAAGAATTCAAGCTTGTAGCTGA 2388 0.42 MVQRKVPSKLGIQAEHVKSDKRLANMKLSSSQHQDGKSRGADMKKKMKKSRSIKLSDLEALQSSSSPSRRSFPQPAKPPPLHTPTTSASPQKQQPLFRTTDGSPNYMKPTSSSHAKKELFPVSLRNTQSGSDFKNLPSKFSSDSKAACAKKPAKALTRSSSLSLVRTLTKTTSFKASRACSRKSTRAAMCADMTAPQRATCSSTLKDSKFPSYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHHVDLPPLKSFMSARRRLLKTQKRAKLEALSPRRLNVPLETDKKDSDVEKNCFKKKSICDEIGIDIFIEIYANKNDAEPTGVEEMGRTDFLEEIEDQEDNKSSIEANGIAASEEGVMQVNTPRIIGILSPSVCEIDLEEDLKKSFDDVAIEVDTNGSFLREQNSEDADENRQPIVWAYEEMSMGSYCSDGEQDMGDVDMVDSDSKTYEMEWKEERFCGFDHEEDADSSVYTEEDNDSKVESSSESSHDVSVTWLDDILGNYYEVFLVDETHKEPNSGESNHFEEEHHGISSVPEDTNGSIETQEIEYSSTGMGCDQSSFTEEIFEYMTNAQDKGGEDEKHVDDGASCNTQTLDEETIDKTQCQKMRETSTIDETSEDGCSSSLENNDESNKRESQIELVDVSEESCIAEQDQDLLEKDQGKGRRFESTNCIGGEEESTSKNSKGAIRRKRGVEDDDEMRKFNPKEPNFLALVPEPEQEKVDLRHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAPKCENRVRNSSAFGHAGRIQACS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02159 795 Pfam Plant calmodulin-binding domain 672 771 IPR012417 GO:0005516
Spst5g02159 795 MobiDBLite consensus disorder prediction 574 636 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 655 703 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 464 485 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 56 71 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 464 490 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 599 615 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 86 112 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 682 703 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 514 533 - -
Spst5g02159 795 SMART CaM_binding_2 659 771 IPR012417 GO:0005516
Spst5g02159 795 MobiDBLite consensus disorder prediction 655 672 - -
Spst5g02159 795 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 771 IPR044681 GO:0005516
Spst5g02159 795 MobiDBLite consensus disorder prediction 514 541 - -
Spst5g02159 795 Coils Coil 329 349 - -
Spst5g02159 795 MobiDBLite consensus disorder prediction 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02159 Spst-Chr5 56967034 56969421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02159 676 795 Calmodulin-binding Proteins AT2G38800 50.833 9.67e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02159 - - gmx:102660315 1171.76