Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02141 ATGGTGGGCATATCAAAACAAAAGCTTTTACCTCTTGATGAAAATCTTGCTGGAGTGGAGTCACGTATACGTGAAATATTATCCCGTTTGCAAATCTCTGATCCCACGGTCATCATGATGGGAATATGCGGAGTTAGTGGAATAGGTAAAACCACTCTGGCTCAAGTTTTGTATGATTACATTAGCCAACAATTTGAAGGTTCATGCTTTATCAGTGACGTCAGAGGAAATTCAGCGAAATATGGGTTTACATTTCTCCAAGAGGCAATTCTTTCTGATATAGCTGGTGAAAATACCAAGGTGGTTAATGAGAACCAAGGAATTTCAATCCTTATTAGGAAGTTGCAAGGCAAAAGGGTTCTTCTGATACTTGACAATGTGGACAACCTGGAGCAATTAGAGTATTTAGCAGGAGAATGCAACTGGTTTGGTTTGGGAAGTAGAATTGTCATAACTAGCACGTGTAGAGATGTTCTAGCTACTCATGGAGTTGAAAATATATATGATGTACCTAAATTAAATTACTATGAAGCTATTCAACTTCTAAGTTCCCAGGTAACCGAGGGACCTGTACCTGATTATTATTATGTGGTTTGGAAACGTGCAATTCACTATTCCAATGGCCTTCCATTGGTTTTGAAGTATATTGGTTCTGACTTGTTAGAAAAAATGAAGGCTGTTGATTTTAGTTTATCAGAAATATCAGTAGAGGAATTGGAGATTGTACTAGAAAAATATGAAGGAGTTTATGAGGGAGGAAAAATTCAGAGTATACATAAAGTGAGTTATGATAGTTTGAATGAATGTGAGAAGAGAATTTTCCTTGATATTGCATGTTTCTTCACCGGAGAGCCAGTGTCATATGTTGAAGAAATACTATCAGCTTGTGGTTTCGAGCCAAAATATTATATTACCAGACTTATTGATAGATCTCTCCTATCTATCACTCCCACTGGAAGCTTTATGATACATGATCATATCAAAGACATGGCCATGAAAATAGTGCAACAGGAATCACCCCTGCATCCAGGAAAACGAAGTAGATTATGGTGCCCTCAAGATGTTCTTCAAGTTTTAAATGAAAATGAGGTTAGTACTATATTCACTGGTTTTATGGTTTTAAATGAAAATGATGTTATGTTTGTATGTACTAGTATGTGA 1161 0.3643 MVGISKQKLLPLDENLAGVESRIREILSRLQISDPTVIMMGICGVSGIGKTTLAQVLYDYISQQFEGSCFISDVRGNSAKYGFTFLQEAILSDIAGENTKVVNENQGISILIRKLQGKRVLLILDNVDNLEQLEYLAGECNWFGLGSRIVITSTCRDVLATHGVENIYDVPKLNYYEAIQLLSSQVTEGPVPDYYYVVWKRAIHYSNGLPLVLKYIGSDLLEKMKAVDFSLSEISVEELEIVLEKYEGVYEGGKIQSIHKVSYDSLNECEKRIFLDIACFFTGEPVSYVEEILSACGFEPKYYITRLIDRSLLSITPTGSFMIHDHIKDMAMKIVQQESPLHPGKRSRLWCPQDVLQVLNENEVSTIFTGFMVLNENDVMFVCTSM 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02141 386 Pfam NB-ARC domain 20 228 IPR002182 GO:0043531
Spst5g02141 386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 359 IPR044974 GO:0006952
Spst5g02141 386 SUPERFAMILY "Winged helix" DNA-binding domain 254 359 IPR036390 -
Spst5g02141 386 Gene3D - 172 267 IPR042197 -
Spst5g02141 386 Gene3D - 4 166 IPR027417 -
Spst5g02141 386 PRINTS Disease resistance protein signature 114 128 - -
Spst5g02141 386 PRINTS Disease resistance protein signature 39 54 - -
Spst5g02141 386 PRINTS Disease resistance protein signature 206 220 - -
Spst5g02141 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02141 Spst-Chr5 56761668 56762828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02141 18 385 WRKY Transcription Factor Family AT5G45050 35.544 2.56e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02141 - - gmx:100796191 552.362