Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02140 ATGATGTTGGTTGACTTGCCACGAGGAAATGAGATACTGAAGTTGAGTGACAAAGCCTTCAAAAATATGAAAAACCTGAGAATGTTAATTATTAAGGATGCCATATATTCTGGAATCCCCCAACATCTCTCAAATAGCTTGAGAGTTTTAATATGGAGTGGATATCCTTCAGAGTGTTTACCACTTGATTTTCTCAACTTTCCTTCTGATTGTCTCATTTTGAACAATTTCAAGAATATGGAGTGTTTGACTACACTGGATTTCACTGATTGTGAATATTTGACAGAAGTACCTGACATTTCAGGAATTTCAGACTTGAGAATATTGTATCTAGATAATTGCATAAATTTGATTAAGATTCATGATTCTGTCGGATTTCTTGGTAATCTTGAAGTGTTGGCAGCAACTGGATGCACTAGTCTAAAAGTAATTCCATTAGCCTTCAAGTTGGCCTCTCTTAGAGTGCTCTCTTTCTCTGAGTGCTTGAGGCTTGCGAGGTTTCCAGAAATATTGTGTGAGATAGAAAATTTGCATTACCTCAACTTGTGGCAAACTGCAATAGAGGAATTACCATTTTCTATTGGAAATATTATAGGGCTTGAATCTCTGAATCTAATGGAATGTGGTAGGCTTGATAATCTACCCAGTAGCCTTTTTACACTACCAAGACTAATGGAAATTCAAGCTGATTCATGCAGAAGGTTTGATATTTCTGTTGAGGGTGAAAACCATGGACAACTGAAATTAACTGCTTCTTCAAACAAAGTTTGTCTGTATCTGAGCTCTTGCAATTTAACAACTGAACATCTTGTTACATGTCTCAGTGGCTTTGCCAATATGGTATATTTGGACATATCTTACAATAATTTTACAGTCCTTCCAGAATGCATTAAAGAATGTGTTCATTTGAAGACTCTTCAGCTAAGCAATTGCAAGCAGCTTCAAGACATTTTAGTGGTCCCTCCTAAATTAAGAGACATTGATGCATTGAACTGCACATCATTGACATCCCAGTCATCAAGTGTACTATTGAACCAGGCATTCCACGCAACTGGGCAGAAAACTGTAATTCTTCCAGGTTCAACGATTCCAGAATGGTTTGATCATTATGGCAGTGAAAGATCCATAATCTTTTGGGGTCGTGGAAGGTTCCCAAGAATCTGTGTGTGTTTTTCTGTTGGAGTGCTGGGGCATGCACTGCACCGTCTTCAAGCTAGATTAAGTATAATCATCAACGGCTATAGAAGAATGCTGTCCCAATGTTGTTACAATTGGTCAATTGAGACAGATCACGTGTGGCTATTTGATCTAACTGCACTTGTTCGTCATGAAGATCTCACTGGAACATTTGTGAAGAGTGATTGGAATCGTGTGGAGATTGAAATAGAAAGGAATGGTTGTATACTGGGAGAGCATGGACCAACAGGAATAATGGCTTTTGTGAAATGCTATGGAGTTCACATTTACAGGCATGAAAGTAAAATGGAGGACATTTCATTCTCACAACCCAAGAATCTACTGGAAAATAATACAAATAAAAGGGTTGGTAATGAGGTTTTGGATTCAGTGAAACGCCAGAAGAGAACTTGGAAGCAAATTCTCAGCGGGATTGACTCCATTCCGGAAGATGAACAATAA 1638 0.381 MMLVDLPRGNEILKLSDKAFKNMKNLRMLIIKDAIYSGIPQHLSNSLRVLIWSGYPSECLPLDFLNFPSDCLILNNFKNMECLTTLDFTDCEYLTEVPDISGISDLRILYLDNCINLIKIHDSVGFLGNLEVLAATGCTSLKVIPLAFKLASLRVLSFSECLRLARFPEILCEIENLHYLNLWQTAIEELPFSIGNIIGLESLNLMECGRLDNLPSSLFTLPRLMEIQADSCRRFDISVEGENHGQLKLTASSNKVCLYLSSCNLTTEHLVTCLSGFANMVYLDISYNNFTVLPECIKECVHLKTLQLSNCKQLQDILVVPPKLRDIDALNCTSLTSQSSSVLLNQAFHATGQKTVILPGSTIPEWFDHYGSERSIIFWGRGRFPRICVCFSVGVLGHALHRLQARLSIIINGYRRMLSQCCYNWSIETDHVWLFDLTALVRHEDLTGTFVKSDWNRVEIEIERNGCILGEHGPTGIMAFVKCYGVHIYRHESKMEDISFSQPKNLLENNTNKRVGNEVLDSVKRQKRTWKQILSGIDSIPEDEQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02140 545 Gene3D Ribonuclease Inhibitor 166 347 IPR032675 -
Spst5g02140 545 SUPERFAMILY L domain-like 9 341 - -
Spst5g02140 545 Gene3D Ribonuclease Inhibitor 4 165 IPR032675 -
Spst5g02140 545 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 16 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02140 Spst-Chr5 56759720 56761565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02140 20 232 WRKY Transcription Factor Family AT4G12020 31.933 6.29e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02140 - - gmx:100796191 839.721