Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02128 ATGCCGGATGTTCAAGGCCTTGTTAATGAATTTGTGAATCTGCTAAAGAAGCGTGAAATTGAAGGGTCTCAGGCCACTGCGAAGCAGACAGCAGAGTTGCTCCGGTCAGTGATTTCGCATCAGCGGGTGCCACACGCAAACCAGGCCACGGCTCTGATTAATGCTGTGAGGGCTGTGGGGGAGCAGATTATTGATGCTAATCCTATTGAGTTGGCTGTGGGAAATATTGTGAGGCGTGTTCTTTATATTATAAGGGAGGAGCATCTTTCCCTTGTTACGGATGCTATGGCTGGTTATGGGATGTCTGCTGCAAGTGATGAGGAAGATGATGTGGAGCGAGATGATTATCCTGCGTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGAACCTTGCGTCCACCATCATTACATACTCTTCTAGAGGATGTGACTGATTCAGCTGCCCTTACACCAATCCCTTCCTCGGCGGGTGATTCCGAAGGGAAAAGTAGATCTGTTGAAAAGGGTGAAAAGGGTACAAGAGGTCGGAAGTTAAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTTCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTAACGCTAGGCAGTTCAAAAACAGTGTTCGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAGGGTTTTTGTTGCTGAAGGTGCCCCAAGGTATCAGGGACATATCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTGCTGATTCTGCAACCTTTGCTATGATTTCCCGAGTGAATATGGTTATAGTTGGTGCTCATGCTGTCATGGCTAATGGTGGAGTAATTGCCCCAATTGGGTTGCATATGGTTGCACTTGCAGCTCATAGGCATGCTGTACCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTCAAGTTCTACTGAATGAGCTGAGATCCCCATCCGAGCTATTAGACTTTGGAGAATTCTCAGATTTGATGGATTCTGCAACTGGTGTTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTCTTCATTACTGACACCGGAGGGCATAACCCTTCCTATATGTACCGGCTCATAGCAGATTATTACTCTGCCGATGATTTGGTGATGAAACAGAAACCTACTACAGGGAATTGA 1257 0.4463 MPDVQGLVNEFVNLLKKREIEGSQATAKQTAELLRSVISHQRVPHANQATALINAVRAVGEQIIDANPIELAVGNIVRRVLYIIREEHLSLVTDAMAGYGMSAASDEEDDVERDDYPALSAAAVAAAARRTLRPPSLHTLLEDVTDSAALTPIPSSAGDSEGKSRSVEKGEKGTRGRKLKHDVIEAVNELIQDITSFHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFRVFVAEGAPRYQGHILAKELAARGLQTTVIADSATFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAAHRHAVPFVVLAGSHKLCPLYPHNPQVLLNELRSPSELLDFGEFSDLMDSATGVGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVMKQKPTTGN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02128 418 Gene3D - 197 402 IPR042529 -
Spst5g02128 418 Pfam Initiation factor 2 subunit family 20 392 IPR000649 GO:0044237
Spst5g02128 418 FunFam translation initiation factor eIF-2B subunit beta 197 403 - -
Spst5g02128 418 MobiDBLite consensus disorder prediction 162 178 - -
Spst5g02128 418 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 409 - -
Spst5g02128 418 MobiDBLite consensus disorder prediction 150 178 - -
Spst5g02128 418 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 407 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02128 Spst-Chr5 56667521 56672024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02128 1 410 Eukaryotic Initiation Factors Gene Family AT3G07300 76.456 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02128 K03754 - gmx:100807877 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02128 5 56667521 56672024 Spst5g02128 5 56667521 56672024 ECH