Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02122 ATGTCGCGGTTTCCGTTCTTCAACAGGTCGAACACGATTCACTCGGAGCCCTCGCGGAAACCCTACATTCCTCAGAGCCAGCAGAATCTGGACCGGTCCGGTTCTCTGAACCGATCCTACGGATCCGTGGAGTCGGCGAAAACCTCAATCCGCGGGAAAATGGTGAAGAAGCTATGCACCCTGTTCGAGTCCTCCTCGAAGAAGATCCCAGAATCGGAATCGAAAGCGCGTTGGGAGTCGTGCACGACGACGACGCCGTTTCGATTGTCCGGGACGGAGGAGCGGATCGTGGTGTATTTAACGAGCCTGCGCGGGGTTCGGCGAACGTTCGAGGACTGCAACGCGGTGCGCATGATCCTGAAGGGGTTTAGGGTTTGGGTGGACGAGAGGGACGTGTCCATGGACATTGCTTACAAGGAGGAGCTGCAACGCGTGCTGGGCGAGCGTCACGTGGCGCTGCCTCAGGTGTTCGTGCGAGGGAAGTACGTGGGTGGCGCCGAGGTGATCAAGCACTTGTTCGAGACTGGGGAACTGGCCAAGATCATTCTTGAAGGGTTCCCCAAGCTCAGACCCGGGTTCGTGTGCGAGAATTGTGGCGACGCTAGGTTTGTGCCGTGCGAGAATTGCAGTGGGAGTCGAAAGTTGTTTGATGAGGACGAAGGGTGCTTGAAGAGGTGTTTGGAGTGCAATGAGAATGGACTCCTTAGGTGCCCTTATTGCTGTTCTTGA 729 0.5665 MSRFPFFNRSNTIHSEPSRKPYIPQSQQNLDRSGSLNRSYGSVESAKTSIRGKMVKKLCTLFESSSKKIPESESKARWESCTTTTPFRLSGTEERIVVYLTSLRGVRRTFEDCNAVRMILKGFRVWVDERDVSMDIAYKEELQRVLGERHVALPQVFVRGKYVGGAEVIKHLFETGELAKIILEGFPKLRPGFVCENCGDARFVPCENCSGSRKLFDEDEGCLKRCLECNENGLLRCPYCCS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02122 242 ProSiteProfiles Glutaredoxin domain profile. 84 189 - -
Spst5g02122 242 CDD GRX_GRX_like 95 237 - -
Spst5g02122 242 MobiDBLite consensus disorder prediction 1 39 - -
Spst5g02122 242 Pfam Glutaredoxin 98 163 IPR002109 -
Spst5g02122 242 Gene3D Glutaredoxin 94 185 - -
Spst5g02122 242 SUPERFAMILY Thioredoxin-like 92 182 IPR036249 -
Spst5g02122 242 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 54 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02122 Spst-Chr5 56613543 56614271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02122 K17479 - gmx:100811108 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02122 5 56613543 56614271 Spst11g00113 11 2463781 2464569 PCT