Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02114 ATGCTTGTACCAAACTTCATTTGGCAAAGGATGGAAGTAATTGCTGGGATAGTCTTACAGAACTTGAACTCTTTTGCTAAAGAGGAGTTTGGAATCGTTTGGAATCTCAAAGATGATGTACAACAAATGAAGAGGACAGTATCTGCAATAAAAGCTGTTCTCCTGGATGCAGAGGCAAAGACCAACAACCTTCAGATCAGTAATTGGTTGGAGGAGCTGAAAGATGTACTATATGATGCAGATGACTTGCTCGATGATATCTCTACTGAAGCTTTGAAGACAAAAGTGATAGGTGGTAGCAGAATCTTGAAAGAGGTACGGATTTTCTTCTCCCGAGCAAACCAAATTGTCTATGGTTTAAAATTGGGTCATGAAATGAAAGCAATCCAGAAGAGGCTAGATGCTATTGCTAAAAACAAGATTACATTGCAATTGACTGACCGTCATACGGAGACTCCAATAGCATACAGGGAGCAGAGAAAAACTTACTCTTTTGTGAGTGAAGATGATGTCATTGGGAGAGAGGAGGAAAAAAAGCTTCTTAAAAGCTATTTGCTACACACCAAAGTGAGTGTGATAGACAATGTGTCTGTAGTTCCCATAGTTGGTTTTGGGGGGCTAGGTAAGACTACCCTTGCTCAACTTGTTTATAATGATAATGCTGTACAACGCTATTTTGAGCAAAAGATGTGGGTGTGTGTCTCAGATGAATTTGACATAAGGAAAATAGCTGAAAAGATAATTGGGAATGATAAGAACAATGAGATTGAGCAAGTACAGCAAGATCTCAGAAACAAAATTCGAGGGCAAAAGTTTCTACTTGTGCTGGATGACGTGTGGAATGAGGATAGGGAGCTGTGGCTTAAATTGAAGAGCTTAGTTATGGAAGGAGGTAAAGGGAGTGCCGTAATTGTAACAACACGTAGTAGGACCGTGGCAAAAATAATGGCCACACATCCACCCCTTTTCTTAAAAGGTCTTGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCTTTTGATGGGGGGAAAGAACCAAATGATCAGGAGTTGTCAGCCACAGGAAGGGATATTGTTAAAAAATGTGCTGGGGTTCCCCTTGCCATAAGAACTATTGGCAGCCTCTTGTACTCTCGAAACTTGGGCCGGAGTGATTGGGTATATTTTAGTGAAGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGCAATCCTTAAACTCAGTTATGATCATCTTCCTTCATTTTTGAAAAATTGTTTTGCTTATTGTTCGTTGTTTCCAAAAGGTTTCGAGTTTGACAAGAAAACACTCATTCAGTTATGGGTGGCTGAGGGGTTCATTCAACCGTCACATGACAATAGATGTGAAGAAGATGTTGGTCATGATTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAGATGTGACCTTAGATGATTGTGGTGGCATTATTACATGTAAAATGCATGACCTGATACATGATTTAGCACAGCTAGTGGTTGGGAAAGAATATGCCTTTGTTGAAGGAAAAAAAGAGAACATTGAAAACAGAACACGTTATTTGTGCTCTTGTACTTCATTACATTTTGCAGAGAAAACATCATCATCTTCCAACAAGTTAAGGACGGTTATTTTGCTTGGAGAGCCACTTTATGGAAGCCAAAGTATGGGTAAGCTACGTCTTCATTTTCCTTTTCTCTTAAGCATAAAGTGCGTACGGGTGTTAAGACTGTCTGGGTTGGATATTACAACACTTCCAAATAGTATTCGAGAGTTGAAGCACTTGAGATATCTTGATCTTACAATGAATAAGTTTCTGGTAAATCTTCCACCAGATGTTACAAGCCTACATAACTTGCAGACTATAAAACTTTCTCAATGTGGCAAACTTAGAGAATTACCCACAGATCTCAACAAAAATCTTAGGCATCTTGAATTGAATGATTGTGAGGCATTGGCATGTATGCCATGTGGGTTGGGACAATTGACCAATCTTCAAACACTCACACATTTTTTATTGGACTGTGGAAGTAAAAATGGTGATATAAGTGAACTGAGTGGGCTAAACAGCCTTAGAGGGAAATTAGTGATTAAATGGTTGGATTCCCTGCGAGAGCATGCTGCAGTGGTTGAGTCTGCAAAGACACTTCTCAAAAAACATCATCTTCAAGAATTGGAATTACGGTGGTGGATTAATGAGAAGGTTTCGCTTTGGGAGGATCCTATTACAACAAGACGTATGAACGAAGAAGAAAGCAGAAAGTTGGAAAATGAGGAGTTATTATTACAAGGCCTGCCAGGCCCATGGCACTCAACTAAAAGACTAAAAAAAGAAAAGAACTGGTTGAAAGATGAGAACGTGTTGGCTTTTATAAGTAAAATGAAGAAAGATGAGAAGATATTGCAAGGCCTGCAGCCACATCACTCAATAAAAAAACTAGTAATAGATGGATATTGTGGCAAAAGTTTACCAGACTGGATCGAGAATCTCTCATCACTCGTGAGTCTTGAAATCAGTAATTGCAATGGTTTGAAATCACTGCCTGATGGCATTCGGAACCTTGTGTCTTTACAACGACTCTCCATATATAACTGCTCACTGCTAGAAAGAAGGTGTGCAAGAGGAAATGGTGAAGAATGGTCAAAAATCGCTCATATCCCAAAAGTTGTAGTCTCTCCCTTTACACCAACTGCTCTCAGATATATTAATTGA 2727 0.3909 MLVPNFIWQRMEVIAGIVLQNLNSFAKEEFGIVWNLKDDVQQMKRTVSAIKAVLLDAEAKTNNLQISNWLEELKDVLYDADDLLDDISTEALKTKVIGGSRILKEVRIFFSRANQIVYGLKLGHEMKAIQKRLDAIAKNKITLQLTDRHTETPIAYREQRKTYSFVSEDDVIGREEEKKLLKSYLLHTKVSVIDNVSVVPIVGFGGLGKTTLAQLVYNDNAVQRYFEQKMWVCVSDEFDIRKIAEKIIGNDKNNEIEQVQQDLRNKIRGQKFLLVLDDVWNEDRELWLKLKSLVMEGGKGSAVIVTTRSRTVAKIMATHPPLFLKGLDLERSWKLFSRVAFDGGKEPNDQELSATGRDIVKKCAGVPLAIRTIGSLLYSRNLGRSDWVYFSEVEFSKIDQHKDKIFAILKLSYDHLPSFLKNCFAYCSLFPKGFEFDKKTLIQLWVAEGFIQPSHDNRCEEDVGHDYFMNLLSMSLFQDVTLDDCGGIITCKMHDLIHDLAQLVVGKEYAFVEGKKENIENRTRYLCSCTSLHFAEKTSSSSNKLRTVILLGEPLYGSQSMGKLRLHFPFLLSIKCVRVLRLSGLDITTLPNSIRELKHLRYLDLTMNKFLVNLPPDVTSLHNLQTIKLSQCGKLRELPTDLNKNLRHLELNDCEALACMPCGLGQLTNLQTLTHFLLDCGSKNGDISELSGLNSLRGKLVIKWLDSLREHAAVVESAKTLLKKHHLQELELRWWINEKVSLWEDPITTRRMNEEESRKLENEELLLQGLPGPWHSTKRLKKEKNWLKDENVLAFISKMKKDEKILQGLQPHHSIKKLVIDGYCGKSLPDWIENLSSLVSLEISNCNGLKSLPDGIRNLVSLQRLSIYNCSLLERRCARGNGEEWSKIAHIPKVVVSPFTPTALRYIN 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02114 908 Gene3D - 327 412 IPR042197 -
Spst5g02114 908 Gene3D Ribonuclease Inhibitor 535 876 IPR032675 -
Spst5g02114 908 FunFam Probable disease resistance protein At1g63360 413 503 - -
Spst5g02114 908 Pfam Rx N-terminal domain 16 95 IPR041118 -
Spst5g02114 908 PRINTS Disease resistance protein signature 363 377 - -
Spst5g02114 908 PRINTS Disease resistance protein signature 833 849 - -
Spst5g02114 908 PRINTS Disease resistance protein signature 266 280 - -
Spst5g02114 908 PRINTS Disease resistance protein signature 198 213 - -
Spst5g02114 908 PANTHER DISEASE RESISTANCE PROTEIN RP 64 867 IPR044974 GO:0006952
Spst5g02114 908 SUPERFAMILY L domain-like 492 872 - -
Spst5g02114 908 Gene3D - 413 503 IPR036388 -
Spst5g02114 908 FunFam Probable disease resistance protein At1g61300 155 321 - -
Spst5g02114 908 Gene3D - 156 320 IPR027417 -
Spst5g02114 908 Pfam NB-ARC domain 195 414 IPR002182 GO:0043531
Spst5g02114 908 Gene3D - 15 127 - -
Spst5g02114 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02114 Spst-Chr5 56551515 56554241 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02114 195 508 WRKY Transcription Factor Family AT5G45050 25.373 1.79e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02114 - - gmx:100781872 1290.4