Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02112 ATGGGTATGGCTGCAGAGACACAGTTTCATGTCTTGGCTGTTGATGACAGCCTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCCTCCTTTCATGTTACTGCAGTGGATTCTGGTAGTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGGGAAGAGAAATGAAGAGCCTCCCACAATTGCTCTAGAAGCCAATCAGGATGTAGAAGTAAACCTGATCATAACCGATTACTGTATGCCAGAAATGACAGGCTATGACTTGCTGAGAAAGATCAAGGAATCTGAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCCTGGAAGATGGAGCTGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTGAGGCCCCATTTGATGAAATCAAAAGTTAAGGATGAAGAAGACCATCATCAAATCAGTAACAAAAGGAAGGAAACAGAAGAAAGCCATTCCCCAGATAAAACAAGGACAAAAATGGAGCCTCCAAAAGTGGTTAATTCCAGTTGA 567 0.4145 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEDGKRNEEPPTIALEANQDVEVNLIITDYCMPEMTGYDLLRKIKESESLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLMKSKVKDEEDHHQISNKRKETEESHSPDKTRTKMEPPKVVNSS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02112 188 SMART REC_2 9 145 IPR001789 GO:0000160
Spst5g02112 188 CDD REC_typeA_ARR 11 141 - -
Spst5g02112 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 171 IPR045279 GO:0009736
Spst5g02112 188 SUPERFAMILY CheY-like 8 141 IPR011006 -
Spst5g02112 188 MobiDBLite consensus disorder prediction 140 188 - -
Spst5g02112 188 MobiDBLite consensus disorder prediction 142 180 - -
Spst5g02112 188 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Spst5g02112 188 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Spst5g02112 188 Gene3D - 10 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02112 Spst-Chr5 56531493 56532823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02112 1 154 Response Regulator Gene Family AT3G57040 67.742 1.52e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst5g02112 Response_reg 5e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02112 K14492 - gmx:100818762 286.189