Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02089 ATGGCATTCATCGATAAGCAAAAAGGAGAAGAAGAAAAGGAACCGTACAGAATGGAAGATGAAGAAGACGACGACGATAGCGAAGAAGAAGAAGAGCATGTATGGGACGATTGGGAAGGAGAGCGAGAATCGGATTTCGCGTGTCTCTTCTGTGATTCCCAGTACAGTTCGTGCAGTTCCTTGTTCGACCATTGTGCCTCCCTTCACCACTTTGATTTCCATGCGATCAGAGCAACTCTCAACCTGGATTTCTATGCCTCCTTCAAGCTCATCAACTTCGTCCGCTCTCAGGTGGCAGAGAACAGATGTTGGAGTTGTGGATTAACATGTCAGTGCAAGCGGGACTTGCAGAATCATTTGCATGATGTTGTTGACTTTAATGAGATAAAGACTCTCTGGAATGATGATAGATATCTAATACCTTTCATGCCAGATGATTCACTGCTGTACAGTTTTGGTGAATGTGACGAAGAAGGTGAAGATGAGCAAATTACACTGATTGATGAAGATCTTATAAAGGATTTGATGAACATTGATGAGAGAATCTGTGATGATCAAGAGTCTGTGAAAAAAGTGGTAGTTGATGACGGAAAACATGATGCTTCTGGTTCTATTGATAATTTGAATAGGGCTAGTTCTTCAAACATAGAACTTGTTAATGGTGAAGACTCAAGGGGACATGCTTTGTGCAATGATAAGGATCCAAAAAGGGGACCTTTAATTTCTAATTCTCAAAATCACTTTGCAAAGCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAGATGTTGAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCTTCTCTACTAAAGGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATACTCAGCCTATTTTCTGCAAAAGCAGGGGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGTCAGCAGTGGCATCGCAGGTTGCTAAAGATAATGGTCTTTTATGCAATAAATGCCAAAGAGGAATTGATGGCCTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAGCCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCTTGCTCTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGATGGTTGAAGCCTGGTGGGGCTATTCTTCCTGACACGGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCGTTTTGGGAAAATGTGTGTAATTTTGATATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCAAATTCCTATTGTTGATGTTCTGGACTCTCAAGATTTAGTTACCAGTTCTGCGATTCTACAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCGACTGCTACTTTGGAATTGAAACCAAGTGCGTCGGCAACATGCTGCTGGTGCTATGGCGTTGTCCTATGGTTTGAAACTGGTTTTACGAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACGTCCCCTTACACGCCAAGAACACATTGGTCACAAACGATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGAAAAGAAAAGAGGGGTAAACTGGAAGCAATTGGCAGTGAAGTGTATCCTGCTGTGAACGTCGATTTACGTATCAGCATTGTCCGTTCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCTGGTGTTGGTCCTGATGGTCAGAAACGTAGTTGGCCCGCACAGCTTTTCAATCTACAGTAG 1869 0.427 MAFIDKQKGEEEKEPYRMEDEEDDDDSEEEEEHVWDDWEGERESDFACLFCDSQYSSCSSLFDHCASLHHFDFHAIRATLNLDFYASFKLINFVRSQVAENRCWSCGLTCQCKRDLQNHLHDVVDFNEIKTLWNDDRYLIPFMPDDSLLYSFGECDEEGEDEQITLIDEDLIKDLMNIDERICDDQESVKKVVVDDGKHDASGSIDNLNRASSSNIELVNGEDSRGHALCNDKDPKRGPLISNSQNHFAKHIKKVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLKGAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMSAVASQVAKDNGLLCNKCQRGIDGLQKGVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCNFDMSCIGKELVIDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPNEVDFTATATLELKPSASATCCWCYGVVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKEKRGKLEAIGSEVYPAVNVDLRISIVRSTEHRSIDISLEAAGVGPDGQKRSWPAQLFNLQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02089 622 MobiDBLite consensus disorder prediction 1 15 - -
Spst5g02089 622 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 256 590 IPR025799 GO:0016274|GO:0018216
Spst5g02089 622 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 568 IPR029063 -
Spst5g02089 622 Pfam Methyltransferase domain 298 413 IPR041698 -
Spst5g02089 622 Gene3D Vaccinia Virus protein VP39 248 417 IPR029063 -
Spst5g02089 622 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 49 604 IPR025799 GO:0016274|GO:0018216
Spst5g02089 622 MobiDBLite consensus disorder prediction 16 38 - -
Spst5g02089 622 MobiDBLite consensus disorder prediction 1 38 - -
Spst5g02089 622 FunFam Protein arginine N-methyltransferase 6 252 417 - -
Spst5g02089 622 CDD AdoMet_MTases 298 416 - -
Spst5g02089 622 Gene3D - 419 618 - -
Spst5g02089 622 SUPERFAMILY beta-beta-alpha zinc fingers 31 164 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02089 Spst-Chr5 56364706 56369851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02089 27 621 C2H2 Transcription Factor Family AT3G12270 54.952 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02089 K11436 - gmx:100781879 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02089 5 56364706 56369851 Spst5g02089 5 56364706 56369851 ECH