Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02085 ATGCCTTTTGGTTTGCCAATGAAGGCCATGGAGCCTACTGTCTGCGGAGACAAGTTAGGTAACCTCATCTTGGAAGTAGCTAAAAACTTTGTTATATATATTGGGATGGTGATTGTCTGCAATGGTTTACATTTTCTTCTAAAGCCTTATAAACAACCTCGCATTACTTCAGACATAATTGTAGGACTAGCTGTGGGCAACATAGGGTTTGTACGTGGACTATTTGAGAAATTCAACCTAACGTTTGGATTTATCATTGATTTTGGAATGACATGTTACATGTTTACCCTGGGGATAGAGATGGATCCTTATGTCTTGTTTGCAAAACCAACTAGGTACACTAAAATTGCTGTAGCAGGAGTTGTATGCACGTTCGTCATGGCAGGGCTTCTAACCCCAATTTTTAAGTACTTCCCAGATCAAAATAAGCTACTGGAGTTCACCCTAGCCTTCTCCACAATTATTTCTAGCACAGATTCACCTGTTTTGACCCGTTTAATAACCCAGATGAAAATAGGAAAATCAGATATTGGGAAGCTTATCATTGGAGCAGGGGTGCACACAGATTTTTTGTGTTGTTTGATGCTTTCCCTTGGCTACATACTTGTGCCAATGCCAGAATATTGTCATAATTTGGAAGGAAGGTTGGAGGCTAATATAACCATTAAAGTAGTGTGTGCAGTGCTGGTGCAAGTAGGGTTCACAGCCATGGTTTCACCAGTGCTTATGAAGTGGGTTAGCAATGAGAACCCTGAAGGTAGACCCATGAAAGGTCCTCACTTGATACTCTCACTTGCCTTCATGGTCTTAATGTGTGCCTCCACCACTATGTATTATTATAATCCAATTTTAAGTGCTTTTCTGGTAGGGCTTTGTGTTCCAAGGGATGGTAGAGTTTCCAAATGGGTTATCACCAGAATCAACTACATGTTGACCACCATTTTCTTTCCCATATTTTTCCTGTGGATGGGCTATGAATCTGATATAAGGAATTTTGAATCACGCCATTTTGCAACATGGATAAGACTAACTTTGCTTTTGGGAGTGGCAACAGGTGGAAAAATTATTGGAACAGTGATCTATGGGATCATGTTGGGCTTTCGCTGGCCTGAATCGGTTGCAATAGGAATGCTTCTTGCCATTAAGGGCCATTTGCATATCTACTTAGCTATGAAAGTGATAGGTTGTGGTGGAACAACTACTTCCACAGGCATTGTGATGGTAATTGGAACCTTTTTAACAACTTTGCCTGCATCAACAATTGTTACAAACATCATTAAAAGAGCAAAGAAAAGAGCACCCACTCATCGATTGGCACTTCAAATGCTTGACCCCTCAAGTGAGCTAAGGATCCTCCTATGTGTTCATGGAATTCGAAATGTTCCTGCTTCCATCAACTTGGTGGAGATCACAAAAGGGACGGGTGACACCGGCATTGTGGTGTATGTCACTGACATGATTGAACTCACTGCTGAAGCATCAGACCCAATAGATAGGGATGAAGTACTGCACTCATCAACAGTGAAAGACAGGGAAGTCATGGAGATGATAGACCAAATAACCAACTCATTCCAAGCCTATGTGGTGGGGAATGATGAGGGCATTACGCTCAAAAGAACAATGGCACTCTCAACAATCACTAGCATGCCACAAGACATCTGCATTTTAGCAGAGGACTTGATGATTGCTCTCATCATATTACCATTCCATAGGAGCCAACGTGATGATGGAAGCTTGGATAGTGGTAATGTAGGATTCAGATACGTGAACCGAAAGGTACTAAGAAGTGCCCCTTGTTCTGTTGGGATTCTAGTAGATAGAGGTCTTGGATCAGTTGAACATATAAAAAGATCTGAAGTAACGCTAAATGTGGCAGTGATATTCATCGGTGGAAAAGATGATAGGGAAGCACTTGCCTACGCTAGTCGTGTAGCGCAGCATGCAAGAGTTAAGCTGACAGTAATAAGATTCCTGGTTGATAGCAGTGTGGAGTCCTCAGCATTATACAGGGTCATCCTTCCAGAGCAGGAGAAAGAGATGAAATTGGATGATGAATGCTTTACACAGTTCTATGAAAGGCATGTGCTTGGGGGTAGAATTTCCTACATGGAGAAGTATCTTGCAAATGCTACTGAGACCTTTGCCACTCTGAGATCCTTTGAAGGGCAATACTCATTGGTGATTGTTGGAAGGGAAGGAGGAATGAACTCTGTTTTGACAAGGGGCATGAATGATTGGCAACAGTGCCCAGAATTGGGACCAATAGGAGATGTTCTTTCTGGAACAGACTTCTCAATGACTGTTTCTGTTTTGATCATCCAACAACATAGACTTAAAGGAGAAATAGATGGGTTGGATGAAGACTTCTCCATCATATAA 2379 0.4178 MPFGLPMKAMEPTVCGDKLGNLILEVAKNFVIYIGMVIVCNGLHFLLKPYKQPRITSDIIVGLAVGNIGFVRGLFEKFNLTFGFIIDFGMTCYMFTLGIEMDPYVLFAKPTRYTKIAVAGVVCTFVMAGLLTPIFKYFPDQNKLLEFTLAFSTIISSTDSPVLTRLITQMKIGKSDIGKLIIGAGVHTDFLCCLMLSLGYILVPMPEYCHNLEGRLEANITIKVVCAVLVQVGFTAMVSPVLMKWVSNENPEGRPMKGPHLILSLAFMVLMCASTTMYYYNPILSAFLVGLCVPRDGRVSKWVITRINYMLTTIFFPIFFLWMGYESDIRNFESRHFATWIRLTLLLGVATGGKIIGTVIYGIMLGFRWPESVAIGMLLAIKGHLHIYLAMKVIGCGGTTTSTGIVMVIGTFLTTLPASTIVTNIIKRAKKRAPTHRLALQMLDPSSELRILLCVHGIRNVPASINLVEITKGTGDTGIVVYVTDMIELTAEASDPIDRDEVLHSSTVKDREVMEMIDQITNSFQAYVVGNDEGITLKRTMALSTITSMPQDICILAEDLMIALIILPFHRSQRDDGSLDSGNVGFRYVNRKVLRSAPCSVGILVDRGLGSVEHIKRSEVTLNVAVIFIGGKDDREALAYASRVAQHARVKLTVIRFLVDSSVESSALYRVILPEQEKEMKLDDECFTQFYERHVLGGRISYMEKYLANATETFATLRSFEGQYSLVIVGREGGMNSVLTRGMNDWQQCPELGPIGDVLSGTDFSMTVSVLIIQQHRLKGEIDGLDEDFSII 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02085 792 Gene3D - 28 435 IPR038770 -
Spst5g02085 792 PANTHER CATION/H + ANTIPORTER 30 777 - -
Spst5g02085 792 Gene3D - 467 745 - -
Spst5g02085 792 FunFam Cation/H(+) antiporter 28 27 435 - -
Spst5g02085 792 Pfam Sodium/hydrogen exchanger family 32 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02085 Spst-Chr5 56304642 56308018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02085 13 792 Antiporter Super Family AT3G52080 47.368 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02085 K26731 - gmx:100786469 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02932 2 29058070 29060710 Spst5g02085 5 56304642 56308018 PCT