Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02066 ATGCTATCTTCAAATGTTGTTCCATCATCATCCCCTCTCACTTTCACCAAACCCAATCCCCATTTCTTCATCAATGCATCTCCCCATCTCAAACCAAATCTTCTCACCAGGTTCCGGACCCAACACAGAGCCACTCCTCTGCAAAGTTCCAAACTTTCTTTCACGCCAAATCAGATCCAACATTTAAGGTCTTTGAACGGACTCCTCCCGCACCCTTTTGAGCCCTCGTCAAAACCCAGACACCAATTCGTTAAGGCTGCATCTGAAGCCAATCCTGAAGGAGAAAATGTTGCCCCCGGTGAACCCAAATCCAAAAATCTCAAACTTGGTCTGGTGTTTGGGCTATGGTACTTCCAAAACATTGTGTTCAACATTTACAACAAGAAAGTGTTAAACATATTCCCTTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTGGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTCAAAGCTTCAGCCTTGTCCAAAAATCTCAAAACCCTTCATCGTTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATTTCAGCTTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACCCATGTCATCAAATCTGCAGAACCGGTTTTCTCTGTCGTGTTTTCTTCTGTTCTTGGTGATAAGTACCCCATCCAGGTTTGGCTCTCCATTCTACCCATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAAAAAAGTTTGCAGAATTTCAAGGAAGTTGATGGCTTGAACTTGTATGGCTGGATTACTATTGTTTCATTTCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGGTCTCAGTGGGTCCCAGGGTATTACAAGGCTATTGAAGCTATAGGCAAAACATCCACATTTTATATCTGGGTGTTACTGTCTGGGGTGTTCTACCATCTTTATAACCAATCGTCATACCAAGCACTGGATGAAATTAGCCCGTTGACTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTCGTGATTGTATCCACGGTTTTGGTGTTCAGGAATCCGGTTCGACCTCTTAATGCTCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCACAGGCAACATCCAAAAATAAAGAAAAGAGAATTGAAGGGGAAAAGAGTAGTTAG 1245 0.4345 MLSSNVVPSSSPLTFTKPNPHFFINASPHLKPNLLTRFRTQHRATPLQSSKLSFTPNQIQHLRSLNGLLPHPFEPSSKPRHQFVKAASEANPEGENVAPGEPKSKNLKLGLVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLLVGSIWMLVLWSSKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVVFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITIVSFLYLFPVAIFVEGSQWVPGYYKAIEAIGKTSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSTVLVFRNPVRPLNALGSAIAILGTFLYSQATSKNKEKRIEGEKSS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02066 414 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
Spst5g02066 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 406 IPR004696 GO:0016020|GO:0022857|GO:0055085
Spst5g02066 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 399 - -
Spst5g02066 414 PANTHER SOLUTE CARRIER FAMILY 35 108 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02066 Spst-Chr5 56102812 56104056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02066 24 412 Antiporters AT5G17630 70.290 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02066 K15283 - gmx:100101869 727.243