Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02049 ATGCTCGATTTCACTCTGTCCAAAGAACGCCGTGTTCCTCTGTCTCTCTTCCTTTCGCATTCTCATTGCCCTTTTGTCCGCAGAAGTGACAGATCTGATCCCGAACGGCGTGATCTGTACGCTGGATCTGCTTTTTCAACTGTCTATCGTCGTGGATCTGTTGTCATCGTCGTTGATCTGTCGTCTAGGCTCCTAGCTTTTGAGATCCGATCCCTTTGTACGCCTTCAAAGGCGGTTTACGATTTTGTTATGCTAACTATAGGTGGACTCAAAATATCGCGCTGTGTTCTATACAAGGACTTATTAAGGAAAGCCGCCATGGTTGACCAGGTCCAACATCCTACAATCATGGAGAAGGTTGCTGGCCAGCTCCATCTCCGTTCTGGTTTTTCATCTGGTATTAAGAGTTCTGATGGGGCTTTCCGCCACCCTGCCATGTACCAAAAACCCTTATTTGGGAGCTACTCAAATGCTGCAATTCAGTATCCTGTGATGCCCTCGTGCAAAACAACAATGGATTTGTCTGCTGTTGCAACAACAGCATCCCCTGTATTTGTTGCAGCCCCAGCAGAGAAAAGCCATTTTCTTATTGACTTTCTCATGGGAGGTGTTTCAGCAGCTGTCTCCAAAACTGCTGCTGCTCCCATCGAACGTGTTAAGCTTTTGATCCAGAATCAGGATGAGATGCTCAAAACTGGAAGGCTTTCTGAGCCTTACAAGGGTATTGGTGATTGTTTTAAAAGAACAATCGCTGACGAGGGTGTTGTTTCTCTATGGAGAGGAAACACTGCAAATGTGATCCGTTATTTCCCCACCCAGGCTTTGAACTTTGCATTTAAGGACTACTTCAAGAGGCTCTTCAATTTCAAGAAGGAAAGAGATGGCTACTTTAAATGGCTTTGTGGCAACTTGGCCTCTGGAGGTGCTGCTGGTGCATCGTCCCTTGTATTTGTTTACTCTCTTGACTATGCCCGTACCCGTCTTGCCAATGATGCCAAGGCTGCCAAAACGGGGGGAGAGAGACAATTCAATGGTCTTATTGATGTCTACAGGAAGACGTTGGCATCTGATGGTATTCGTGGTCTCTACCGTGGTTTTGCCCTCTCATGTGGTGGAATCATTGTGTATCGTGGTCTGTATTTTGGAATGTATGATTCTGTGAAACCATTCGTCCTCACCGGATCATGGGAGGATAGCTTTTTTGCCAGCTTTGCCCTTGGATGGGTCATCACCAATGGTGCAGGACTTGCATCTTACCCAATTGACACTGTGAGAAGAAGAATGATGATGACCTCTGGTGAAGCTGTCAAGTACAAGAATACCTTCGATGCATTCCAGCAAATCGTGAAGAAAGAGGGTACCAAGTCCTTGTTCAAGGGTGGTGCTGCCAACATCCTCCGTGCTATTGCAGGTGCTGGTGTGCTTGCTGGGTACGACAAGTTGCAGGTTCTTGTGTTCGGCAAGAAGTATGGTTCTGGTGGAGGTGCTTAA 1491 0.4675 MLDFTLSKERRVPLSLFLSHSHCPFVRRSDRSDPERRDLYAGSAFSTVYRRGSVVIVVDLSSRLLAFEIRSLCTPSKAVYDFVMLTIGGLKISRCVLYKDLLRKAAMVDQVQHPTIMEKVAGQLHLRSGFSSGIKSSDGAFRHPAMYQKPLFGSYSNAAIQYPVMPSCKTTMDLSAVATTASPVFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGIGDCFKRTIADEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKERDGYFKWLCGNLASGGAAGASSLVFVYSLDYARTRLANDAKAAKTGGERQFNGLIDVYRKTLASDGIRGLYRGFALSCGGIIVYRGLYFGMYDSVKPFVLTGSWEDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKNTFDAFQQIVKKEGTKSLFKGGAANILRAIAGAGVLAGYDKLQVLVFGKKYGSGGGA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02049 496 PRINTS Adenine nucleotide translocator signature 298 311 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 PRINTS Adenine nucleotide translocator signature 195 207 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 PRINTS Adenine nucleotide translocator signature 272 284 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 PRINTS Adenine nucleotide translocator signature 239 260 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 PRINTS Adenine nucleotide translocator signature 403 419 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 198 211 IPR002067 GO:0055085
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 211 225 IPR002067 GO:0055085
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 313 331 IPR002067 GO:0055085
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 261 281 IPR002067 GO:0055085
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 363 381 IPR002067 GO:0055085
Spst5g02049 496 PRINTS Mitochondrial carrier protein signature 407 429 IPR002067 GO:0055085
Spst5g02049 496 Gene3D Mitochondrial carrier domain 196 491 IPR023395 -
Spst5g02049 496 Pfam Mitochondrial carrier protein 300 392 IPR018108 -
Spst5g02049 496 Pfam Mitochondrial carrier protein 399 486 IPR018108 -
Spst5g02049 496 Pfam Mitochondrial carrier protein 193 290 IPR018108 -
Spst5g02049 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 390 IPR018108 -
Spst5g02049 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 286 IPR018108 -
Spst5g02049 496 FunFam ADP,ATP carrier protein, mitochondrial 196 491 - -
Spst5g02049 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 398 484 IPR018108 -
Spst5g02049 496 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 186 494 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst5g02049 496 SUPERFAMILY Mitochondrial carrier 193 480 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02049 Spst-Chr5 55922395 55925536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02049 107 494 Antiporters AT5G13490 77.551 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02049 K05863 - gmx:100789942 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02049 5 55922395 55925536 Spst5g02049 5 55922395 55925536 ECH