Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02033 ATGTATGGGAGAACAGCTTGCCAACTTGTGAAAGAATTTGCAAGCGGAGATAAGGGCCAGCTTGTGTCATTCAATAGTGACTTGTTTCAACAAGTTGTTGCAGAATGCAGTCAACATCACCTTGAGCTTCAGTCCTTGATCAGGAAGATACAGGAAGAAGGTTTGGATATCCAAACGGCCAGAAATGCAGATCACTACGGAGCCCTTATCCATCATCTTGCTTTAGTCCGAAATAAACGTTGCCTAATGGCCTATGTGTTTAATCGAGCAGAAATTATACGAAACTTGTTATGGAAGATAGGGCATGTACTTCCTCAAGAAATTGAAGAGAAGCTTTGTCACACGGAGGAAGAACATTTCAAGAAGCATTCTACAGCATTGAAATCTTATATGTCGAAAGTGATGGTTGATCTGACCGTGGATATGGTACCACCAAAAGATCCTTACATCAAAGTACGGGTCCTTGATGACATTGGAGATGGCATTCTGCTTAGTGATGATAAGACTGCAAATTTTGCTTGCCATTCAATGCACCTTCTGAAGCGAACTGATGCCGAGCAATTTATCTCACGGGGCCAAATGGAGGAACTCACGGGTTGA 600 0.425 MYGRTACQLVKEFASGDKGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTARNADHYGALIHHLALVRNKRCLMAYVFNRAEIIRNLLWKIGHVLPQEIEEKLCHTEEEHFKKHSTALKSYMSKVMVDLTVDMVPPKDPYIKVRVLDDIGDGILLSDDKTANFACHSMHLLKRTDAEQFISRGQMEELTG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02033 199 CDD GINS_B_Psf1 148 197 - -
Spst5g02033 199 Gene3D - 1 134 - -
Spst5g02033 199 Pfam GINS complex protein 47 116 IPR021151 -
Spst5g02033 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Spst5g02033 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
Spst5g02033 199 PANTHER PARTNER OF SLD5 1 198 IPR005339 GO:0000811|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02033 1 199 Core DNA Replication Machinery Family AT1G80190 69.307 3.77e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02033 K10732 - gmx:100780798 339.347