Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02006 ATGACCACTCACAAGCTTAGATGTTGTGCAAACTTCCTTGAGAACTCTAAACACCACTTTGCCATGATTGCTTTGCAATTTGGCTATGCCGGCATGAACATCATCACCAAGGTTTCCCTCAACCGTGGCATGAGCCACTATGTTCTTGTTGTTTATCGCCATGCCTTTGCCACTGCTGTCATAGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCTCAATTTTCATGCAAATTTTCATCCTAGCTCTACTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTGACATCACCAACCTTTTCTTGTGCAATGAGCAACGTGCTTCCTGCAATGACTTTTGTGATGGCAGTTTTATGCAGGATGGAGAAGATCAACATGAAGAAGGTGAGGTGCCAAGCAAAAGTGGTGGGAACATTGGTGACTGTGGGTGGGGCCATGTTGATGACCTTGTACAAAGGACCTGTAGTGGAGATGGTTTGGACCAAACATGCCCTTCATCAGAGGCAAGCCAATAATGCAACAACAAATGCCTCAACACCTTCTGACAGAGATTGGCTCATTGGCTCCATCCTCCTAATCATTGCCACACTTGCCTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATTGAAACCTACAAAAATCACCAGCTGAGCCTCACTTCACTCATCTGCTTCATAGGCACCATTCAAGCCACTGCTGTTACTTTTGTTATGGAACACAAGGCATCAGTGTGGACAATTGGCTGGGATATGAACTTACTTGCTGCTGCCTATGCTGGGATTGTTACATCAAGCTTATCATACTACATCCAAGGATTGGTAATTAAGAAGAAAGGACCTGTTTTCGCAACTGCATTTAGCCCTCTCATGATGATCATTGTAGCCATCATGGGTTCCTTTATCCTTGCAGAACACATTTTTCTTGGAGGTGTGCTTGGTGCCGTCTTGATCGTTATAGGGTTGTACTCAGTTCTTTGGGGAAAACACAACGAACAAGTGGAGAATATAGTGGTGGAGGATATTCCCTTGCCTTTGAAGGGTGCAATGCTTGAAGCAAATCCAGATTCCATTGATCACAAATCTGATTCCAACAACATCTCTTCACACATTATTAACGTGAACAATGAACCTCCATTCAAATCTAACAATTAA 1185 0.4338 MTTHKLRCCANFLENSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFSIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLVTVGGAMLMTLYKGPVVEMVWTKHALHQRQANNATTNASTPSDRDWLIGSILLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFIGTIQATAVTFVMEHKASVWTIGWDMNLLAAAYAGIVTSSLSYYIQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEHIFLGGVLGAVLIVIGLYSVLWGKHNEQVENIVVEDIPLPLKGAMLEANPDSIDHKSDSNNISSHIINVNNEPPFKSNN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02006 394 Pfam EamA-like transporter family 197 336 IPR000620 GO:0016020
Spst5g02006 394 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020
Spst5g02006 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Spst5g02006 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 340 - -
Spst5g02006 394 PANTHER WAT1-RELATED PROTEIN 20 348 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02006 Spst-Chr5 55545168 55547275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02006 1 382 Nodulin-like Gene Family AT5G07050 66.835 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02006 - - gmx:100804359 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02006 5 55545168 55547275 Spst5g02006 5 55545168 55547275 ECH