Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02005 ATGATGGACACCAACAGCTTCTCTCTGTTGGGTCTTCTTCACTTCATCCACTCCTCTGAACTTCTCAGGGACTTCGCCACGCGAGAACTCAACGCCTTTTTATGGCTATCTCTTGTTGTTGTCACCACCCTTTTGCTCAGAAGATTGCTCAGCCTCTTTGGGTTGTGGCGCAGAGCTAGGACCATTCCTGGGCCTCCCTCATCCTCTTTCTCTGGCCACTGCAAGCTCTTTTCCCGGCCTAATTTCACCTTTACTGATGTGTTGTCAGAATCCCATCAAAAGTATGGACCAATTGTTAAGCTGTGGTTAGGTCCTACTCAGCTTTTGGTGTCCGTAAGGGATCCGGCGTTAATCCAAGAGATGCTCACAAAAGCCGAGGATAAGTTGCCTTTTACGGGAAAAGTGTTTCATCTAGCCTTTGGGCAATCGAGCCTCTTTGCCCCTTCCTTTGAAAAGGTGCAAAAGAGAAGGGAATTATTAGCTACAGAATTAAATGAAAGACTGCTGAAGAATGATGATATGATTCCTGTGAAGGTTGCGGATTTTATTTCTGATAAAATAGAAAAAATCAGAAAGAAAGGAGGTATTGATTCCAGGTTGGTTTCTCAGCATATGGCTTTCACTATAATGGGAGCCACGTTCTTTGGAGATGGCTTCTTGGCCTCGTCGAAGGCTGCAATGTATGAGGAACTGTTTATGACAATCGCTAAAGATGCTTGCTTTTGGGCCTCGTATAACGTTACTCCTTTCTGGAGACGTGGATTTTGGAGGTACCAAAGCTTATGCACAAAGTTGAAATGCTTAACTGAAGACATCCTTCAACATTGCAGAAAAGGCTGCAAACTATTTGGCTATACCGACCAAGATGTACATAATGAAAGTTCCAACAAAGGTGGTTCACAATGCTGCTCTGATGGTGAGTTCCAAGATTACTATTTCTTTCGTGATCTTAAGGATTATCAAGATGGTAAAGAAGAACCTTGTGGGAACGTCATGCGCATGATATTTCATGGATGCCAATCTACATCTGCTTTAATCACCAATGTATTGACTAGGCTTGTCATGCATATGGAAATACAGGATAAGGTTTATTCGGAGATTATCATGGTAGGAAGAAACCCATCGAAATATGAGCATGAAGATGTTTATAGGATGCCTTTGTTATTGGCGACAATTTATGAATCTGCACGCCTTCTACCCACTGGTCCCATGCTGCAGAGGTGTTCTTTGAAACATGACTTGAGCTTTGCAACTGGAGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCTGTTGAATTGCTACAGAAGGACGACTTCAGTTGGGGGAGTGATGCAAGTCATTTTAATCCTTACCGATTTCTCTCAACTGTTACAAAGGGATCAGGTTCTGCCGAAGACCTTTCTGTTACAGGATTCAGTTCATTTGTACTAAATGATCCAAATGAAAATGCAGCATTCCTTCCTTTTGGATCCGGTGCACGTGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTCAAAAAATATGAGATACAGCTTAGCTCAGGCTCAGATGATGACAAAAACCCAACCTTGAAGAATAATCTTCCTCAGCGTCATCCCAGTTCACAGATATTATTCGTGAGAAGGGAGCAGTGA 1665 0.4288 MMDTNSFSLLGLLHFIHSSELLRDFATRELNAFLWLSLVVVTTLLLRRLLSLFGLWRRARTIPGPPSSSFSGHCKLFSRPNFTFTDVLSESHQKYGPIVKLWLGPTQLLVSVRDPALIQEMLTKAEDKLPFTGKVFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNDDMIPVKVADFISDKIEKIRKKGGIDSRLVSQHMAFTIMGATFFGDGFLASSKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWRYQSLCTKLKCLTEDILQHCRKGCKLFGYTDQDVHNESSNKGGSQCCSDGEFQDYYFFRDLKDYQDGKEEPCGNVMRMIFHGCQSTSALITNVLTRLVMHMEIQDKVYSEIIMVGRNPSKYEHEDVYRMPLLLATIYESARLLPTGPMLQRCSLKHDLSFATGVTIPAGAVLVVPVELLQKDDFSWGSDASHFNPYRFLSTVTKGSGSAEDLSVTGFSSFVLNDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLKKYEIQLSSGSDDDKNPTLKNNLPQRHPSSQILFVRREQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02005 554 Pfam Cytochrome P450 63 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Spst5g02005 554 PANTHER CYTOCHROME P450 33 524 - -
Spst5g02005 554 CDD cytochrome_P450 96 545 - -
Spst5g02005 554 Gene3D Cytochrome P450 56 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g02005 554 SUPERFAMILY Cytochrome P450 62 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02005 Spst-Chr5 55524621 55529155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02005 32 543 Cytochrome P450 AT1G13710 22.581 2.96e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02005 - - vum:124847778 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02005 5 55524621 55529155 Spst5g02005 5 55524621 55529155 ECH