Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01990 ATGTATATAAGAGAATTCATATGTTCTATTGTTCCACTTGCAGCAAAAAAGGGAGGTTCAGTTAACTCAAAAACATTGATCATAATCATAGTGAGTGTATTGGTGGCACTAGTTTTACTATGTTGCTCTATCTACTACTTTTGGAGGAAGAATCTGTCAAATAAAGATGGATTGGTATCAGTGAAAAGCCCTGCATCTTTCCATGGCAATGTTCAAAGAGAGGAAGCACTGAATGCAGACCTTCCTACAATCCCTTTAATCTGGATTCAACAGAGCACTAATAACTTTTCAGCGATTTCTAAATTAGGAGAAGGTGGATTTGGTCCAGTTTACAAGGGTAATTTAGAAGATGGAACAGAAATTGCTGTCAAAAGACTCTCTAAAACATCTGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTCATCTTCATAGCCAAACTGCAACATAGGAACCTTGTGAGACTCTTGGGGTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTGTATGAGTACATGCCAAATTCTGGCCTTGACTCTCACCTGTTCAACTTTGGATTGGCAAGAACATTTGCAAAAGGCCAGAGTCATGAAAATACAAACAGAGTTATGGGCACCTATGGATACATGGCTCCAGAATATGCCATGGAAGGACTGTATTCAGTAAAATCTGATGTCTTCAGCTTTGGAGTTCTTCTATTAGAAATCATGTGTGGGAAAAAGAATAGTGGATTCCATCTTTCAGAACATGGTCAAAGTCTTTTGGTTTATTGTTGGAGACTTTGGTGTGAAGGAAAAGGCTTGGAACTGTTAGATCCAATGCTGGAAAAGACATACAAAGCCAGTGAAATTATGAAATGCATACACATAGGTTTGCTGTGTGTTCAAGAAGATGCAGCTGATAGACCAACCATGTCCACAGTTGTTGTCATGCTAGCAAGTGACACAGTGACCCTTCCCCATCCTAATTATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGAAGATGAATCAACATCAAAAGGATCCCAGGATCCTTCTGTTAATTATGTACCAATGTTGACCAAGAATCAAGATTATCCTTTAAACCCTCACCTTTTGCGACTGATTTTTCAATGTGACAAATTTCTATTCTACTTGCCCAACCCCACCTACGCGCTTCCTGATAGAAACGAAGCTGTTTAA 1182 0.3917 MYIREFICSIVPLAAKKGGSVNSKTLIIIIVSVLVALVLLCCSIYYFWRKNLSNKDGLVSVKSPASFHGNVQREEALNADLPTIPLIWIQQSTNNFSAISKLGEGGFGPVYKGNLEDGTEIAVKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSGLDSHLFNFGLARTFAKGQSHENTNRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIMCGKKNSGFHLSEHGQSLLVYCWRLWCEGKGLELLDPMLEKTYKASEIMKCIHIGLLCVQEDAADRPTMSTVVVMLASDTVTLPHPNYPAFSVGRKIKEDESTSKGSQDPSVNYVPMLTKNQDYPLNPHLLRLIFQCDKFLFYLPNPTYALPDRNEAV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01990 393 ProSiteProfiles Protein kinase domain profile. 96 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01990 393 Pfam Protein tyrosine and serine/threonine kinase 99 181 IPR001245 GO:0004672|GO:0006468
Spst5g01990 393 Pfam Protein tyrosine and serine/threonine kinase 183 310 IPR001245 GO:0004672|GO:0006468
Spst5g01990 393 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 190 316 - -
Spst5g01990 393 Gene3D Transferase(Phosphotransferase) domain 1 167 315 - -
Spst5g01990 393 SUPERFAMILY Protein kinase-like (PK-like) 82 330 IPR011009 -
Spst5g01990 393 Gene3D Phosphorylase Kinase; domain 1 60 166 - -
Spst5g01990 393 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 184 347 - -
Spst5g01990 393 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01990 Spst-Chr5 55435934 55440229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01990 18 328 Receptor kinase-like Gene Family AT4G23230 43.597 2.64e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01990 PK_Tyr_Ser-Thr 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01990 - - mtr:25490357 432.565