Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01982 ATGATGACGACAGAAACTCAGAGGGTAGTGGTAATCCAGGATGCATCAAGAGATGTTAGTGCAAAGGCTATCCTTGGGGCCCTGGAAAAGTTTTCTGTTAAAGCTGGTGATCAGCTTATAATTGTTGCTATCCTTGACTGGATTAGCAGTCCCATGGGTTACATGGTCAGAGTTGATTCTAGTTCAATGATTTCAACAAACAAGAAAATAATTGAAAAAAGGCATTCCAAAAAAAAGAAAGAATATCTTGTGAGCAGAAACATAAAGGAAATCTCCAACTACTGTAAATTAAATGAGATTGGATTCCAAATTGAAGTGCTTGTAGGCCCCACTGCTGAGGTTGCTTCTAATGCTGCCAAGGATTTTCAGGCTACAACTTTGATTTTATTTAGACAGATCCACAAAGACATGAAGTATTTCATGCGCCAGCACCCTTGTGGTATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAACAGCCAGCACCAAATCACTTTTAGACAGGCTAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTTTTCAGACAGTGTCTAGGTCTTCATCAAGTGATATGTTGACATCAACTGGAGCCTCAAGTCAGTGGAGTACAGAAGTCTCCAATTCTAGTTTCGGAAGCTTGCAGAATGGCCGTCAATACCTAGAGGGAAACTTTCATTCAAATATACAAGAAACAGCAGGGAACCAAACACTATTTCACATTTCGGAGGATGAAGAAATGAACGAATTGGAAGAAAATAGAAAAGAGAAACATGGTAGAAATAATGAAACATCTCATATGCAGGAAGAATTTACAAATCCACTTTGTTCTGTGTGCAATAATCAACGACCAAAAGTTGGACTGAAGAGAGATTTCAGTTATGCAGAGCTCTATAATGCTACACAAGGATTTTCTCCCAAGAACTTTCTGTCAGAAGGTGGATTTGGATCTGTCTACAAAGGACTGTTAAATGGAATGAAGATTGCAGTTAAGCAACATAAGTGTGCAGGCTTCCAAGGAGAGAAGGAATTTAAGTCAGAAGTGAATGTACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAACGAAATAATAGGCTACTTGTGTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTATCAGCACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATTGGAGCTGCCAAAGGCTTACGGTACTTACACAAGAATAACATTATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATTATCAACCATTGCTGGGAGACTTAGGATTAGCAAGAAACCAAAATCAAGACTCGATACACTCAACGGAAGTTATTGGAACTTTGGGGTATTTGGCACCAGAATATGCAGAGCATGGGAAAGTGTCTACCAAAACAGATGTATACTCTTTTGGAGTGGTTCTACTACAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAAAGATAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAACTCTCATGATGTCCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTCTAAGCAGGGAGCCTCAAAGGAGGCTAAATATGATTCAGGTTGTTGATGTTTTGACTGACATACTGGAAGGAAGAAGATGTGACATCATATTAAGGGATTACTCCCCTACAAGGTCAGATTCAAACTATAGTACATCAGACTCTGATGAATCAGAAGATGAAATGCAAGAATCCTTCAAGCTTGAAGATGATTTACTAAGTCACAGTTCAGAATCCACAGAAAGTAATATCATAAGTCAGATGATGCACATGAATGTAAGACAGCCACCATCCCCTCCAATTCAAAGCATCTCTTCATGTAGCTCATGCTCATACAAGTTTCACGATGAGTCAACAAGGGATGGTGAAGCAATAGAAATATCAAAATCCAATGGGGGATTACTCAATGCTTAG 2079 0.3886 MMTTETQRVVVIQDASRDVSAKAILGALEKFSVKAGDQLIIVAILDWISSPMGYMVRVDSSSMISTNKKIIEKRHSKKKKEYLVSRNIKEISNYCKLNEIGFQIEVLVGPTAEVASNAAKDFQATTLILFRQIHKDMKYFMRQHPCGMYRITSDNSIERLKDPKSTASTKSLLDRLENVSYKEMFPGSEEEERSFQTVSRSSSSDMLTSTGASSQWSTEVSNSSFGSLQNGRQYLEGNFHSNIQETAGNQTLFHISEDEEMNELEENRKEKHGRNNETSHMQEEFTNPLCSVCNNQRPKVGLKRDFSYAELYNATQGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKCAGFQGEKEFKSEVNVLSKARHENVVVLLGSCSERNNRLLVYEYVCNGSLDQHLSAHSRSPLSWEDRINIAIGAAKGLRYLHKNNIIHRDVRPNNILITHDYQPLLGDLGLARNQNQDSIHSTEVIGTLGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLKDRNYPDLIDERIINSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDVLTDILEGRRCDIILRDYSPTRSDSNYSTSDSDESEDEMQESFKLEDDLLSHSSESTESNIISQMMHMNVRQPPSPPIQSISSCSSCSYKFHDESTRDGEAIEISKSNGGLLNA 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01982 692 PANTHER OS01G0253100 PROTEIN 206 583 - -
Spst5g01982 692 MobiDBLite consensus disorder prediction 599 621 - -
Spst5g01982 692 Gene3D Phosphorylase Kinase; domain 1 291 392 - -
Spst5g01982 692 SMART tyrkin_6 318 580 IPR020635 GO:0004713|GO:0006468
Spst5g01982 692 SUPERFAMILY Protein kinase-like (PK-like) 304 609 IPR011009 -
Spst5g01982 692 ProSiteProfiles Protein kinase domain profile. 318 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01982 692 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Spst5g01982 692 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 393 595 - -
Spst5g01982 692 Pfam Protein tyrosine and serine/threonine kinase 323 578 IPR001245 GO:0004672|GO:0006468
Spst5g01982 692 MobiDBLite consensus disorder prediction 197 222 - -
Spst5g01982 692 FunFam Proline-rich receptor-like protein kinase PERK8 280 392 - -
Spst5g01982 692 MobiDBLite consensus disorder prediction 183 222 - -
Spst5g01982 692 Gene3D Transferase(Phosphotransferase) domain 1 393 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01982 Spst-Chr5 55353423 55358567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01982 306 588 Trihelix Transcription Factor Family AT5G38560 46.026 4.88e-79 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst5g01982 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01982 - - gmx:100794450 1077.39