Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01981 ATGTCTTGTCTACACAAACAAGTTAAACAAGAAAAACAGCACATGAGCAACCATGAAGCACACCAAACGGTTGCACAATCTGTTTGCTCTGTGTGCTATAACAGAAGACCACAATTTGAAAGACACAGAAAGAGAGACTTCAAATATGCTGAGTTGTATGCAGCCACACAAGGCTTTTCCCCTAAGAACTTTCTGTCAGAAGGGGGGTTTGGTTCTGTCTACAAAGGGGAGTTGTGTGGACAGAAGATTGCTGTTAAGCAACACATCTGTGCAAACAGCAAAGAAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAACGCATGATAATGTGGTCATGCTGTTAGGATCATGCTCCGAAGGGAACCATAGACTTCTTGTGTATGAATATGTCTGCAATGGTTCATTGGACCAACATTTATCTCAACATTCTCGTAAACTTCTTAATTGGCAAGACAGGGTGAAAGTAGCTGATGGAGCTGCCAAAGGATTGCTATACCTGCACGAGAACAACATTATACACAGAGATATGACACCAAACAACATTCTTCTTACACATGACTATGATGTATTGCTAGGTGATTTTGGTTTGGCTAGAACTGTTATAGAAGACTCCTCATACTCCACAGACTGTGTTGGGAATCTGGCTTATATGGCACCAGAATATGCAGAATTTGGCAAAGTGTCAATCAAGACAGATGTGTATTCCTTTGGGGTGGTTCTACTACAGCTAATAACTGGAATGAGAACCACAGACAAACGAGTAGGAGATAAAGGTCTAGTGGGATGGGCTAGACCACTATTAAAGGAAGGAAAATGCCAAGCACTTATTGATGGAAGGATGATCAACTCCCATGACTGCCATCAACTCTATTGGATGAGCCATCTAGCTGGAAATTGCCTGAAGAGGGATCCTCAAAAGCGATTCCATATGAGTACAGTGGTGAAGGCCTTAAATCAGATAGGCAAAGGATGTAGCTGCCTTGTGAGAAAAGAGCACACGCTTCTCATCTCAGGCCATTCTAAGTCCAAAGATGATACACAGGACTCCTCACAATCAGAAGAGTGGAAGTGA 1083 0.4238 MSCLHKQVKQEKQHMSNHEAHQTVAQSVCSVCYNRRPQFERHRKRDFKYAELYAATQGFSPKNFLSEGGFGSVYKGELCGQKIAVKQHICANSKEEKEFKSEVDALSKATHDNVVMLLGSCSEGNHRLLVYEYVCNGSLDQHLSQHSRKLLNWQDRVKVADGAAKGLLYLHENNIIHRDMTPNNILLTHDYDVLLGDFGLARTVIEDSSYSTDCVGNLAYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRTTDKRVGDKGLVGWARPLLKEGKCQALIDGRMINSHDCHQLYWMSHLAGNCLKRDPQKRFHMSTVVKALNQIGKGCSCLVRKEHTLLISGHSKSKDDTQDSSQSEEWK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01981 360 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 350 - -
Spst5g01981 360 Gene3D Phosphorylase Kinase; domain 1 14 133 - -
Spst5g01981 360 SUPERFAMILY Protein kinase-like (PK-like) 45 323 IPR011009 -
Spst5g01981 360 ProSitePatterns Tyrosine protein kinases specific active-site signature. 175 187 IPR008266 GO:0004672|GO:0006468
Spst5g01981 360 Gene3D Transferase(Phosphotransferase) domain 1 134 337 - -
Spst5g01981 360 Pfam Protein tyrosine and serine/threonine kinase 63 321 IPR001245 GO:0004672|GO:0006468
Spst5g01981 360 PIRSF ILK 9 337 - -
Spst5g01981 360 FunFam Proline-rich receptor-like protein kinase PERK8 19 133 - -
Spst5g01981 360 ProSiteProfiles Protein kinase domain profile. 59 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01981 360 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 134 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01981 Spst-Chr5 55347180 55349681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01981 47 355 Trihelix Transcription Factor Family AT5G38560 42.857 5.03e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst5g01981 PK_Tyr_Ser-Thr 8.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01981 - - gmx:102663919 593.193