Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01979 ATGAAGAGGTGTCAACGAGCTGGCTTGCCACTTTATCCTCCTGAAGTAGTTGTGCAAGCATTTCAAGATAGTAAACATGGGCAAAGTGAAATTAGAGATGGAGATGGAGGTCAACATGATTTTCTGGAGGAAAACAATTATGAGATACATGATGCAATATTTGACCGTCTGAAGGAAAATCATGAAAGCTTACCTTTTGTGCCAGAGCTACCTGATATTTCTGCCAACAGCATTCTGCCAAATGTTCTTGGTTCTGCTCCATTATGTAATTTCCTGCCATCCACATTACCTCACCATGATCATCTTCAAGAGTCAACCATGTCTTTTATCAATTCCACTGAATTGAACAGTAATGGGTTTTATCCATTTGACCAATTTAAGGATAATACTTCTGATAAAATTGCAGAATCATTTGGATTCCATTCTCCCTTTGATCATGGTGCCTCCTCTTATGGCTCAATTTGTTACGGCCATTCACTATCTAATGACAATTACTCTACTTCTAAGCTGACTTCTGAGGCTGTGAGGTCAAATGACAATTACTCTACTTCTAAGCTGGTTTCTGAGGCTGTGAGGTCAGAGCTCCCTTCACTCCAATATCCAGCAGATACTGAATTTGGTTGTTGGGGTACCTCTCCCCCAGCTCCATTGAATGAGTCTTTTGATGTTTTCATTCATTCTCCTCAACCACCTTATGCACTAGACTCAGGGTCTTCTTCACTCAATCATTATTTACTTGATGAATATCTTTATCAGCAGGCCAAGACTCTTAGTTGTTCAAAGAATAATTGGTCTGACAAGAGTTCGAGTTCATCTATTGCAACTCCTGGTGACAGAGCTGAGAGTTCGGCTTTGAACATGTATGAGACAGAGTGGGAGGATTATGCTGACCCTGTATCTCCCTTTGGTGCAACATCAATCCTGAATGAACATCCTGTTGTTAGCACCAATGGAAAGTCGTGGGATGGATGGGAACCTTTTCATACATTTAGTGGCAACAATGAGAAATTGCAGTCAGTTGACCAGGTTTTAGCCCCTAAGAGTGAAAATCAACATATGTCTATGCTGAATCTCACTTGGCCAGATGTAACCCTGGCCTCAGATTGGAATGAGATGTATCCTGTGCATGATGGCATGAACCAAGCTGACATGATTGATGTTAGTGATGATTTCAATACACAGTAA 1185 0.4093 MKRCQRAGLPLYPPEVVVQAFQDSKHGQSEIRDGDGGQHDFLEENNYEIHDAIFDRLKENHESLPFVPELPDISANSILPNVLGSAPLCNFLPSTLPHHDHLQESTMSFINSTELNSNGFYPFDQFKDNTSDKIAESFGFHSPFDHGASSYGSICYGHSLSNDNYSTSKLTSEAVRSNDNYSTSKLVSEAVRSELPSLQYPADTEFGCWGTSPPAPLNESFDVFIHSPQPPYALDSGSSSLNHYLLDEYLYQQAKTLSCSKNNWSDKSSSSSIATPGDRAESSALNMYETEWEDYADPVSPFGATSILNEHPVVSTNGKSWDGWEPFHTFSGNNEKLQSVDQVLAPKSENQHMSMLNLTWPDVTLASDWNEMYPVHDGMNQADMIDVSDDFNTQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01979 394 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 372 - -
Spst5g01979 394 MobiDBLite consensus disorder prediction 261 280 - -
Spst5g01979 394 MobiDBLite consensus disorder prediction 261 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01979 Spst-Chr5 55335255 55336762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01979 1 369 MYB Transcription Factor Family AT5G06100 27.200 2.81e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01979 K09422 - gmx:100792349 560.836