Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01977 ATGAACCTTGATGAGCTTCTGAAATTTGTGTACACTTCTGAAGCAAACCAACATACCATTGTGGACATGAGGGGTACAACACAAGCCAGCTTGTCCTTAACCAATGCTCTAAGCAGGAAAACTGTTGATGAGGTTTGGAGAGATATACAAGGAGGCAAAGATAGCAAGGAGAAAAAGTCTAAAGGGAGACAACCTAAATTTGGAGATATGACATTGGAGGATTTCTTGGTGAAAGCAGGGGTTGTTACTGAAGAATCTTCTGCCACAGTTGGTGTTAATCCAAATGTGGTGACACCACAGTTCCCTCAACATCCTCCTTGGATGCAGTATCCACAACCACATTATCAGCATCCACAAGGTTTAATGGGGATTTATATGACTAACCCGAACATTGCACAATTACACCTACGAGCGGGTGCTGCATCAGATGGATATGCAGAGGGTCAGCTGGCATTGGCAGATTCTAGGAGACATGGCAGAAAACGGGCTACGCTGGAAGAGTTGGTCGAGAGGACCGTTGAGAGGAGACAAAAGAGGATGATCAAGAATAGGGAATCTGCTGCACGTTCTAGAGCAAGGAAACAGGCTTACACAACTGAGCTGGAGAACAAAGTGGCGCAATTGGAAGAGGAAAATGGAGAGCTGAGGAAACAGAAGATGAAGCAATCACACAATGGAACTGGTTTCCATTGGGAGCAAATAATGAAGGAAGAAGGTTGGCTTTTAGTAGGGATGAAAGGAGGTGGAGAATATGTTAGCAAGTGTGAAACCAGAAGAACCAAGATACCAGATTCGTCGAACTTCGTCGGCGACATTTTGAAAATTGTGTTGTAG 834 0.4436 MNLDELLKFVYTSEANQHTIVDMRGTTQASLSLTNALSRKTVDEVWRDIQGGKDSKEKKSKGRQPKFGDMTLEDFLVKAGVVTEESSATVGVNPNVVTPQFPQHPPWMQYPQPHYQHPQGLMGIYMTNPNIAQLHLRAGAASDGYAEGQLALADSRRHGRKRATLEELVERTVERRQKRMIKNRESAARSRARKQAYTTELENKVAQLEEENGELRKQKMKQSHNGTGFHWEQIMKEEGWLLVGMKGGGEYVSKCETRRTKIPDSSNFVGDILKIVL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01977 277 SMART brlzneu 171 226 IPR004827 GO:0003700|GO:0006355
Spst5g01977 277 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 231 IPR043452 GO:0003700|GO:0045893
Spst5g01977 277 SUPERFAMILY Leucine zipper domain 175 219 IPR046347 GO:0003700|GO:0006355
Spst5g01977 277 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 173 225 - -
Spst5g01977 277 Pfam bZIP transcription factor 175 218 IPR004827 GO:0003700|GO:0006355
Spst5g01977 277 Coils Coil 191 225 - -
Spst5g01977 277 Gene3D - 173 225 - -
Spst5g01977 277 CDD bZIP_plant_BZIP46 175 219 - -
Spst5g01977 277 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 218 IPR004827 GO:0003700|GO:0006355
Spst5g01977 277 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01977 Spst-Chr5 55318492 55320354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01977 1 219 bZIP Transcription Factor Family AT3G56850 46.667 1.57e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g01977 bZIP_1 4.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01977 K14432 - gmx:100784924 259.61