Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01970 ATGGAAGGAGGGTTAGGGCAAAACTCAGTTCCTGTTCATGGTTCCATTGATAAGTCTAGGATCTTGGATGTTAAACCTCTGAAGAGTTTGATTCCTATTTTCTCCATGTCATCTCAAGCTCCAGCTCCTGGCCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCCTTTGGTGCACCTCAGCAAGCTCCAACTGAAGGGACAGCAAGGGGTGCTGCCATACCTGCTCCAATAAGGGCATATAGGAGCCCACCACGAGCAGGAGATACTAGTTCAACAATGGAAGGGTTGAAAGATCAACATACTTCTGGGAAGAAAAAACGTGGATCACCGAAGTCAGGCAGCGCCAAATCATCTTTTGTTAAGACTAAGAAAAGTCAGGAGCCAATTGTTGATTTAGGTGCTTTAGTTGGTATTAGCCCTGCTCAAAAGGAGGATGGTAGCCGTGAAGTGGTTAATTTTGTGCTCATGGCGTTTGATGGGCTACGAAGAAGGCTCTGCCAACTTGAAGAGGCCAAGGAATTGAGCTTGGGTCCGATCAAGCGTCCAGATTTGAAAGCTTGCAATACTTTGATGAGCAAAGGAATCCGGACAAACATGAGGAAGAGAATAGGAACAGTTCCTGGGGTTGAGATTGGGGACATTTTCTTTTACCGAACGGAAATGTGTGTTGTGGGTATGCATGCTCCCTCCATGGGTGGAATTGATGCCTTGCATATTAGGGATGAGTTTGAGGAGGAAACTCTGGCTGTCAGCATTGTTTCATCAGGAGAATATGATGATGATGCCGAGGATATCGATGTTATAACTTATACTGGTCAGGGAGGGAACTTCTTAAAGAAAGACAAGCACGCCATTGACCAAAAACTTCAAAGGGGTAATCTTGCTTTGGATAGGAGTTCCCAGCAACACAATGCAATAAGAGTCATCCGAGGCATTAGGGATGTTGTGAATCCAAATGCAAAAATCTATGTCTACGATGGTCTGTATAAAATCCAGGATTCATGGATAGCAAAAGCAAAAGGTGGTGGGGATGTATTTAAGTATAAGTTGGTAAGAATGGCTGGACAGCCTAGTGCCTTTTCTGTTTGGAAATCAGTTCAGAAATGGAAATCTGGCTCTTCAAGGACTGGACTTATTCTTGCAGACATTTCCAATGGAGCTGAGAGTATTCCTGTATCACTTGTCAATGAGGTTAATAATGTTAAGGCGCCTACTTATTTCAATTATTTCCATTCTCTTAGGCATCCTAAATCATTCAGTTTGATGCAGCCTTCACATGGGTGCACCTGTACTAAAGCATGTGTCCCAGGTGATTTGAACTGCTCTTGCATTAGGAGAAATGAAGGTGACTTCCCATATACTGGTAATGCCATTCTGGTGAGCCGGATGCAATTGGTTCATGAATGTGGCCCCACATGCCACTGTTTTCCTAACTGCAAAAACCGAGTATCCCAAACCGGTTTAAAGCATCAAATGGAAGTGTTCAAAACAAAGGATAGAGGGTGGGGTCTTCGGTCGCTGGATCCTATTCGTGCTGGTACTTTCATCTGTGAATATGCAGGAGAAGTTGTTGACAGAGCCAAGGTAAGTCAGCTTTTGAGGGAAGGAAATGAGTATGTTTTCGACACAACCCGGATTTATTGTCAATTCAAGTGGAATTATGAGCCTAGGCTTTTGGAAGAAGTTGATCCTAATGACTCTAGTGAGGATTATGCCATGCCATATCCTTTAATCATAAATGGCAAGAATTTGGGAAACGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCTGTTGTATATGAAGAAAACAATCAATCGTACCTCCATGTTGCTTTTTTTGCACTCAGACACATTCCACCCATGACAGAGTTAACATATGATTACGGAGTTGCCCGATCTGACCGTGGTGAGGGTAGCAGTGCAGCCAAAGGTAGAAAGAAATGCTTATGCGGATCATCAAAATGCTGTGGTTCTTTTGGTTAA 2001 0.4343 MEGGLGQNSVPVHGSIDKSRILDVKPLKSLIPIFSMSSQAPAPGQYPSGFSPFFPFGAPQQAPTEGTARGAAIPAPIRAYRSPPRAGDTSSTMEGLKDQHTSGKKKRGSPKSGSAKSSFVKTKKSQEPIVDLGALVGISPAQKEDGSREVVNFVLMAFDGLRRRLCQLEEAKELSLGPIKRPDLKACNTLMSKGIRTNMRKRIGTVPGVEIGDIFFYRTEMCVVGMHAPSMGGIDALHIRDEFEEETLAVSIVSSGEYDDDAEDIDVITYTGQGGNFLKKDKHAIDQKLQRGNLALDRSSQQHNAIRVIRGIRDVVNPNAKIYVYDGLYKIQDSWIAKAKGGGDVFKYKLVRMAGQPSAFSVWKSVQKWKSGSSRTGLILADISNGAESIPVSLVNEVNNVKAPTYFNYFHSLRHPKSFSLMQPSHGCTCTKACVPGDLNCSCIRRNEGDFPYTGNAILVSRMQLVHECGPTCHCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDRAKVSQLLREGNEYVFDTTRIYCQFKWNYEPRLLEEVDPNDSSEDYAMPYPLIINGKNLGNVARFMNHSCSPNVFWQPVVYEENNQSYLHVAFFALRHIPPMTELTYDYGVARSDRGEGSSAAKGRKKCLCGSSKCCGSFG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01970 666 ProSiteProfiles Post-SET domain profile. 650 666 IPR003616 -
Spst5g01970 666 SMART preset_2 380 474 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst5g01970 666 Gene3D - 186 372 IPR036987 -
Spst5g01970 666 Pfam SAD/SRA domain 203 356 IPR003105 -
Spst5g01970 666 SMART G9a_1 199 356 IPR003105 -
Spst5g01970 666 SUPERFAMILY PUA domain-like 186 373 IPR015947 -
Spst5g01970 666 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 64 666 IPR025794 GO:0016571
Spst5g01970 666 Pfam Pre-SET motif 383 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst5g01970 666 SMART set_7 490 641 IPR001214 GO:0005515
Spst5g01970 666 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 93 660 - -
Spst5g01970 666 MobiDBLite consensus disorder prediction 74 122 - -
Spst5g01970 666 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 187 371 - -
Spst5g01970 666 Gene3D SET domain 373 665 IPR046341 -
Spst5g01970 666 ProSiteProfiles SET domain profile. 490 635 IPR001214 GO:0005515
Spst5g01970 666 ProSiteProfiles Pre-SET domain profile. 426 487 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst5g01970 666 ProSiteProfiles YDG domain profile. 204 352 IPR003105 -
Spst5g01970 666 Pfam SET domain 501 635 IPR001214 GO:0005515
Spst5g01970 666 SUPERFAMILY SET domain 389 663 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01970 Spst-Chr5 55230137 55232137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01970 1 666 Su(var)3-9 homologs AT1G73100 50.218 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst5g01970 SAD_SRA 1.5e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01970 K24405 - gmx:100812173 1074.69