Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01964 ATGGGCTCGCTCGAAACCCCATCCGCTGCGGAAAACGGTTCCGCTCCTTCCGCCGGCAACGGCAAGTCCATGTCCGTCGACGGCACGGAGGCGACGCCGGAGCCCGACACGACCAAAAGGCGGAGATCGTCGGTACTCCCCTTGGAGGTCGGGACGCGCGTCATGTGCCGATGGAGGGATGGCAAGTACCATCCCGTCAAGGTCATCGAGCGCCGCAAGGTTCCCAACGCCATCCCCAGCGATTACGAGTATTACGTCCATTACACCGAGTTCAATAGAAGACTTGATGAGTGGGTTAAGCTTGAACAGCTTGATCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCGACTGGCTTGAAGATGACACGTCACCAAAAAAGGAAGATTGATGAGACACATGTAGAGGGACATGAGGAGCTTGATGCTGCCAGTTTGCGGGAACATGAGGAATTTACAAAAGTGAAAAATATAGCTACCATTGAGCTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTTAAGCATCCTCCTGGTGATGAGATATATAGAAGTGGAACACTGTCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTAGCAAAGTTATTCCTTGATCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGTTGTCACATGGTTGGCTATTTCTCCAAGGAAAAACACTCTGAGGAATCTTACAATTTGGCATGTATCTTAACCCTTCCACCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCTTTCTCATATGAACTGTCCAAGAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTAGATATTCTGAAGAAGCACAAGGGGAACATTTCAATAAAGGAACTGAGTGATATGACTGCCATTAAAGCTGAAGATATATTAACCACCCTGCAGAGTCTAGAATTGATTCAATACAGGAAAGGTCAACATGTGATCTGCGCAGATCCCAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGGAGGGGGGGCCTGGAGGTTGATGTTAGCAAATTGATCTGGACGCCTTATAAAGAACAAACTGTAGCTGTTAGATCCCGCATGCCTTTTGGGCCTTTGGGCAATGATTGCATTCGGGCCGAATGGAATCCATGA 1374 0.4636 MGSLETPSAAENGSAPSAGNGKSMSVDGTEATPEPDTTKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRKVPNAIPSDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQTVAVRSRMPFGPLGNDCIRAEWNP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01964 457 PANTHER HISTONE ACETYLTRANSFERASE 52 431 - -
Spst5g01964 457 Gene3D - 337 417 IPR036388 -
Spst5g01964 457 MobiDBLite consensus disorder prediction 1 32 - -
Spst5g01964 457 Pfam MYST family zinc finger domain 160 214 IPR040706 -
Spst5g01964 457 FunFam Histone acetyltransferase 38 158 - -
Spst5g01964 457 Pfam MOZ/SAS family 219 396 IPR002717 GO:0004402|GO:0006355|GO:0016573
Spst5g01964 457 Gene3D - 159 215 - -
Spst5g01964 457 SUPERFAMILY Chromo domain-like 41 159 IPR016197 -
Spst5g01964 457 CDD NAT_SF 270 328 - -
Spst5g01964 457 Gene3D - 37 158 - -
Spst5g01964 457 CDD CBD_MOF_like 51 120 - -
Spst5g01964 457 MobiDBLite consensus disorder prediction 1 45 - -
Spst5g01964 457 Pfam RNA binding activity-knot of a chromodomain 48 106 IPR025995 -
Spst5g01964 457 SMART chromo_7 62 121 IPR000953 -
Spst5g01964 457 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 159 430 IPR016181 -
Spst5g01964 457 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 158 429 IPR002717 GO:0004402|GO:0006355|GO:0016573
Spst5g01964 457 FunFam Histone acetyltransferase 217 345 - -
Spst5g01964 457 FunFam Histone acetyltransferase 337 416 - -
Spst5g01964 457 Gene3D - 217 429 - -
Spst5g01964 457 FunFam Histone acetyltransferase 157 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01964 4 434 C2H2 Transcription Factor Family AT5G64610 85.714 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01964 K11308 - gmx:100819168 863.603