Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01958 ATGCTGTCGCCACCCATTACGACTTATTCTTCAAAGCTCCTTCTTCTTCCCTCAACAACGTCTTTGACCTTAATCATCTTCCCCATCAACACGCTTCTTCTTCTTCTTCTTCAACAATCTCACACCTCTTTCTTATATACCCTTTTCTCTCTTTTCAACTGCTCTTCTCAAAGTGTTCATCCTTCACATGTTTTCATTCTCTTATGCATCATGGGTTCTAAGAGGCCACTTGTGATCATGACACCACCAACAACAACAACACCTGATAACTACCAACAAGACCCTCCCGCTGTTATTGTTCCTGAACTTCCAACGTCGAAGTCAAGTTCCAGCAACGCCTTGCACCCATTTGAGAACACTCTTGTTAACTCATCATCACGCAGAAGTTCCATGTCCATTCACTCTTCTGGGAGCAAGAGCAACAACTCTATCCTTGAAGTGAGTTTGAGCGGTTCAGGATCCAAATCCATACCTGTTAGGTATGGCTCAAAGGGTGCAGATTCTGACGGGCTAAGCGTGTCACAGAGGGAACTCAGAGATGAGGATGCGAGGTTAGTGTACATAAATGACCCTTTGAAAACCAATGAGACCTTTGTGTTTGCTGGAAACTCTATTCGTACAAGCAAATACTCCCTCCTCAGTTTCATTCCCAAAAACCTTTTTGAACAGTTCCACAGGATTGCTTACGTGTACTTTCTCATAATTGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGAAGAGCTGTTTCCATCTTGCCATTGTCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGCGTATGAGGATTGGAGAAGGCACAACAGTGATAAAATTGAGAACAATAGGTTGGCATCAGTTTTGGTTGATGGAAACTTTGTGGAGAAGAGGTGGAGGGATGTTAGAGTTGGAGAGGTGATAAGGATCAAGGCAAATGAACCCATACCCTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACCGGGGTTGCATATGTGCAGACTATTAATCTAGATGGGGAGTCCAATTTGAAGACAAGGTACGCAAAGCAAGAGACGCGTGGTAAAGAGGGGTTTGGTGGGGTGATTAAGTGTGAGAAACCCAATAGGAATATATATGGATTTCTGGCTAACATGGAAGTTGATGGCAAGAAGTTGTCACTTGGATCCTCCAACATTGTGCTTCGTGGATGTGAGCTCAAGAATACTAATTGGGCTATTGGTGTTGCTGCGTATTGTGGGAGTGAAACCAAGGCTATGCTCAATAGCTCAGGAGCTCCTTCCAAGAGGAGCAGATTGGAGACACGCATGAATTTTGAGATCATTTGGCTTTCTTTCTTCCTCGTGGCATTGTGCACAATCACCTCAGTTTGTGCTGCTGTGTGGTTGAAGCGCCACAAGGATGAGTTGAATCTGTTGCCATATTATAGGAAACTAGACTTTTCAGAAGAGGGGGAAGTGGAAAGCTACGAGTACTATGGATGGGCGTGGGAAGTTGTCTTCACATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAGGCCTTCTTCATGATCCGAGACAACAGAATGTATGATGAGGAAACAAAATCAAGGTTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCAGATAAAACGGGCACACTAACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTTTACAGAGAGCAGCATGGAGGGTGATCAACTTGAACATTCTGTGGAAGGTGAGATTTATTTACTTCTAGTACACACCTTTTTAGCATTGCCTTTAATGCCTCATGGTTTTGTTTATGAGCGAAATAATAATACTAGACGTTTGTTTTGTGTTATTATCTGCTTAGTGGATGGAAAGGTCTTCCGACCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCAGCTAGCAAGAAGTGAATTTCTCAATTTGGAGGGTAAACGGATTCATGATTTCTTTCTAGCACTGGCAACATGCAACACTATTGTGCCTCTGGTTGTAGACTCACCTGACCCTGATGTCAAGCTGATGGATTACCAAGGAGAATCACCAGATGAACAAGCATTAGCTTATGCTGCTGCAGCCTATGGTTTTATGCTAATTGAACGAACCTCTGGCCATATAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTTTTGGGTATGCATGAATTTGATAGTGACAGGAAGAGGATGTCAGTTATATTGGGGTACCCTGACAACTCTGTGAAAGTGTTTGTCAAAGGAGCAGACACATCAATGCTTAATGTGATAGAGAAGTCATTTAGCATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCCATAGGTTTGAGGACACTTGTTATTGGGATGAGAGATTTGAATGCTTCAGAATATGATCAATGGCATTCATCCTTCGAGGCAGCGAGCACTGCTGTGTTTGGCAGGGCTGCGATGCTCCGCAAGGTTTCTAGCATTGTAGAGAATAGTCTCAGCATATTGGGAGCGTCTGCCATTGAAGATAAACTGCAACAAGGTGTACCTGAATCCATTGAGTCTCTAAGGATTGCAGGGATTAAAGTGTGGGTTCTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAAAATGAATCAGATTATAATCAACAGCAATAACAAAGAAGCATGCAGAAAAAGTTTGCAAGATGCGCTTGTCATGTCTAAAAAGCTCATGTCCACATCTAGGGTTGCCAACAGTGCTGGAGGAAGTTCAGAGGAGACTCCAATAGCCTTGATTATTGATGGAACCAGTCTTGTGCATATTCTTGAAAGTGACCTTGAAGAACAGCTATATGAACTAGCAAGTGGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCACTTCAAAAGGCTGGAATTGTTTCCCTTGTGAAGAATAGAACATCTGACATGACTCTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAAAGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTGGTTCCTCTCTTATTGATACATGGGCACTGGAATTACCAACGGCTGGGTTACATGATACTATACAATTTTTACAGAAATGCTGTCCTTGTTCTAGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCACCACGTTATATTCAATAATCTACAGTTCATTGCCAACCATAGTTGTTGCTATTCTAGACAAGGATCTTGGTAAAAGGACTCTCCTAAAGTACCCTCAACTTTATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAGATTGTTTGCGTTGACAATGTTAGATACTTTGTGGCAAAGCATGGTCATCTTTTGGGCACCTCTCTTTGCTTATTGGCATAGCACAGTTGATGTGGCCAGCATTGGAGACCTTTGGACTTTTGGGGTTGTCATTTTGGTTAATTTGCACTTGGCCATGGATGTTGTAAGGTGGTATTGGGTGACCCATGTTGCCATTTGGGGTTCTATTGTTGCAACTTTCATTAGTGTCATGATCATTGATGCTTTCCCCAATCTTCCTGGCTACTGGGCCTTCTTTCATGCTGCAGGAACTCGATTGTTCTGGTTATTGTTGCTTGGAATCATAATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATTTGTTTATCAATATTACTTTCCTAATGATATTCAGATTTGTAGGGAAACTGAGAAGAATGGGTATGAGACAGTTGTTGAAATCCACTTTAGAGTACTTCTGTTTGTGCCGGATTTCATTGGTTGCTATCCGAAGGATAGAGGTTTTGTTATCACTTCAGAGTGTAGAATCATGGCCAAAGCTGAAGGTGGTAAGGAACCAATAAATGAACAAGCAGTTGCAAATATGTATGCTTCTATGAGGTCTGAGCTCAACCAAATTTACTCCAAAATAACTGAACTGGAGATGGAAGTTAGTGAGCACATATTGGTCATCAATGCCATTCAGCCACTTGACCAATCTAGACGATGCTATCGAATGATTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCGGTGCAGCGAAATAAAGAGGGTCTTGAAGAGGTTGTTGCAAGGCTTAATGAGGCATTGGAAAAGAAGAAAAAGGAAATTACTGAGTTTGAGACTAAATATAAAATTAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCTGGAAGGAAGGAAGGTTCTGCTCAAGGAGTTCTTGTGGGTCCTGCAGGTGGAAGTGAATGA 4458 0.4251 MLSPPITTYSSKLLLLPSTTSLTLIIFPINTLLLLLLQQSHTSFLYTLFSLFNCSSQSVHPSHVFILLCIMGSKRPLVIMTPPTTTTPDNYQQDPPAVIVPELPTSKSSSSNALHPFENTLVNSSSRRSSMSIHSSGSKSNNSILEVSLSGSGSKSIPVRYGSKGADSDGLSVSQRELRDEDARLVYINDPLKTNETFVFAGNSIRTSKYSLLSFIPKNLFEQFHRIAYVYFLIIAILNQLPQLAVFGRAVSILPLSFVLFVTAVKDAYEDWRRHNSDKIENNRLASVLVDGNFVEKRWRDVRVGEVIRIKANEPIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETRGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTNWAIGVAAYCGSETKAMLNSSGAPSKRSRLETRMNFEIIWLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSEEGEVESYEYYGWAWEVVFTFLMSVIVFQVMIPISLYISMELVRVGQAFFMIRDNRMYDEETKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSFTESSMEGDQLEHSVEGEIYLLLVHTFLALPLMPHGFVYERNNNTRRLFCVIICLVDGKVFRPKMKVKVNPELLQLARSEFLNLEGKRIHDFFLALATCNTIVPLVVDSPDPDVKLMDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRQKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIEKSFSMDLVRATEAHLHSYSSIGLRTLVIGMRDLNASEYDQWHSSFEAASTAVFGRAAMLRKVSSIVENSLSILGASAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSKMNQIIINSNNKEACRKSLQDALVMSKKLMSTSRVANSAGGSSEETPIALIIDGTSLVHILESDLEEQLYELASGCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQKADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSTTLYSIIYSSLPTIVVAILDKDLGKRTLLKYPQLYGAGQRHEAYNKRLFALTMLDTLWQSMVIFWAPLFAYWHSTVDVASIGDLWTFGVVILVNLHLAMDVVRWYWVTHVAIWGSIVATFISVMIIDAFPNLPGYWAFFHAAGTRLFWLLLLGIIIAALLPRLVVKFVYQYYFPNDIQICRETEKNGYETVVEIHFRVLLFVPDFIGCYPKDRGFVITSECRIMAKAEGGKEPINEQAVANMYASMRSELNQIYSKITELEMEVSEHILVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEITEFETKYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01958 1485 SUPERFAMILY Calcium ATPase, transmembrane domain M 200 1290 IPR023298 -
Spst5g01958 1485 SFLD Haloacid Dehalogenase 551 1074 - -
Spst5g01958 1485 PRINTS P-type cation-transporting ATPase superfamily signature 567 581 - -
Spst5g01958 1485 PRINTS P-type cation-transporting ATPase superfamily signature 1023 1042 - -
Spst5g01958 1485 Coils Coil 1416 1450 - -
Spst5g01958 1485 FunFam Prefoldin subunit 2 1350 1457 - -
Spst5g01958 1485 Gene3D - 257 423 - -
Spst5g01958 1485 FunFam Phospholipid-transporting ATPase 862 1063 - -
Spst5g01958 1485 FunFam Phospholipid-transporting ATPase 258 423 - -
Spst5g01958 1485 ProSitePatterns E1-E2 ATPases phosphorylation site. 569 575 IPR018303 -
Spst5g01958 1485 Gene3D - 862 1063 IPR023214 -
Spst5g01958 1485 Pfam Phospholipid-translocating P-type ATPase C-terminal 1051 1291 IPR032630 -
Spst5g01958 1485 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 176 1311 - -
Spst5g01958 1485 MobiDBLite consensus disorder prediction 103 144 - -
Spst5g01958 1485 MobiDBLite consensus disorder prediction 1462 1485 - -
Spst5g01958 1485 SFLD p-type atpase 551 1074 IPR044492 -
Spst5g01958 1485 Gene3D - 500 563 - -
Spst5g01958 1485 Coils Coil 1359 1379 - -
Spst5g01958 1485 Gene3D - 711 843 IPR023299 GO:0000166
Spst5g01958 1485 Gene3D - 564 576 IPR023214 -
Spst5g01958 1485 NCBIfam HAD-IC family P-type ATPase 993 1109 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst5g01958 1485 NCBIfam HAD-IC family P-type ATPase 498 588 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst5g01958 1485 NCBIfam phospholipid-translocating P-type ATPase 200 1298 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst5g01958 1485 Pfam E1-E2 ATPase 286 524 - -
Spst5g01958 1485 SUPERFAMILY Calcium ATPase, transduction domain A 283 420 IPR008250 -
Spst5g01958 1485 Pfam Prefoldin subunit 1353 1457 IPR002777 GO:0006457|GO:0016272|GO:0051082
Spst5g01958 1485 SUPERFAMILY HAD-like 562 1078 IPR036412 -
Spst5g01958 1485 Pfam Phospholipid-translocating ATPase N-terminal 186 252 IPR032631 -
Spst5g01958 1485 FunFam Phospholipid-transporting ATPase 710 843 - -
Spst5g01958 1485 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 573 876 IPR023299 GO:0000166
Spst5g01958 1485 SUPERFAMILY Prefoldin 1353 1454 - -
Spst5g01958 1485 Gene3D - 577 588 IPR023299 GO:0000166
Spst5g01958 1485 Gene3D - 1351 1459 IPR009053 -
Spst5g01958 1485 Pfam Cation transport ATPase (P-type) 691 789 - -
Spst5g01958 1485 CDD P-type_ATPase_APLT_Dnf-like 202 1183 - -
Spst5g01958 1485 MobiDBLite consensus disorder prediction 82 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01958 Spst-Chr5 55108069 55117751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01958 116 1303 Primary Pumps ATPases AT5G04930 64.124 0.0 1613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01958 K14802 - gmx:100813982 2004.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01958 5 55108069 55117751 Spst5g01958 5 55108069 55117751 ECH