Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01955 ATGGCCGAAGTCATCAACATGCCTCCTGAATCTCTGGATCAATCTCCCTCCGCTTCCGCACCTCCTCCTCCACCAGCCGCCGCCGACGATCTCCCTCCTCCGCGACGGCGGGACCGCCGGGATGATCGGGATATAGACCGCCAACCCAACCGCGGCCGCGATTACTACGACCGCGACAGGGACTTCAAGCGCCGCCGAAGCCCCAGCCCCGGCTACCGCGACCGCCGCTACTCTCCCCCACCGGCGTCGCGCCGCTCGCCTCCACCGTACAAGAGGTCCCGGAGGGGAAGCCCCCGTGGCTATGGACCCGAGGACAGATTTGGCTATGAGTATTTTGGTGGCTATGAACGAGGAGTGGGTGGAAGGACTGGTTATGCAGATGAGAAGTCTTATGGCAGGCTTGCGCATCGATCTGCTGGGGGATATCATAATGGGATGTCTGATATGGATATCAACCGTGGTTATGGAGATTTGCCAAGTGGAGGTGCACAAAGGTCTGTTAACACTTGGATGCTTTTGAATGATTTCAGAGAGGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAAGATGATGTACTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAATATATTTCTACTCAAAAACGATCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTAAAAGATAAATATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGGCTTGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTAGATCTAAATCCTGGTTTGAATTCCTCTTCATCCAGTAAATCAGGGCAAGCCAGCGAACCTAATTCAGAGGAAGAAACAGATGGTGGCATTAAGCGAAGAAGACATGGTAGGGGACCTAATAAAGATAATGATTTCTCAGCAGCACCAAAGGCTCACCCTATCACCTCTGAACCCAGACGGATTCAAGCAGATATTTTACAAGCTCAGTCTGTCGTTCGAAAGCTTGACATGGAGAAGGGTATTGAAGATAATATTTTATGTACTAGTGACCACAATAGAAATGATGATAAGTCTCACAGTGGGTCTGTGGGGCCCATAATAATTATCCGGGGATTAACATCGGTTAAGGGCTTAGAGGGTGTTGAGCTATTGGACACACTTATTACATATCTTTGGAGGATTCATGGTATTGATTATTATGGAATGATTGAGATTAATGAGGCCAAGGGTTTTAGACATGTGAGACCAGAAGGAGAAGGGCATGAAGAAACAACTAAATCAGGTTCTGAATGGGAGAAGAAACTTGATTCATTTTGGCAAGGAAGGTTGAATGGTCAGGATCCATTGGAATTGATGACTGCCAAGGAGAAGATAGATGCTGCAGCAGCTGATGTGTTGGATCCATATGTTAGAAAAATTAGGGATGAGAAATATGGTTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCGGCTGAATTTGTGCACAAACATTTGAAGCTAAAACATCCTGAGCTTGTGATGGAACTGACCTCAAAATTGCGTGAGGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACACCTGTCATGCAGCAACCTCAGAAGGATAAGCCTCTAAAGCGAAGATTAGGAGGTTTGGAGGGCCGATTGAAAGATGATCGTGGTAACCGGCGAGACCAGGACAGGAGTGACAAAATGAATGGAGATAGGCCTGATAGTTCCCCATCCAATGAAAGGCAAATGGGAAACCATGATGAAGCAATGTATGATGCATATGGAGGGCCAGGTATACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCTGTTTTGATGCCTGTACCTGGTGCTGGTCCCTTGGGACCCTTTGTCCCTGCTCCACCAGAAGTTGCAATGCAAATGTTAAGGGAGCAAGGAGGACCTTCATCGTATGATGCCTCAGGAAGGAAGATGCGATCTGGTCCTCATATGGGTGGACCAGCGCCTATAATTGCTGTCCCTCCATCCTTTAGACCAGATCCTCGACGGATGCGCAGCTATCAAGATCTGGATGCCCCAGAAGACGAAGTAACTGTGATTGACTATCGGAGTTTGTAG 2139 0.4703 MAEVINMPPESLDQSPSASAPPPPPAAADDLPPPRRRDRRDDRDIDRQPNRGRDYYDRDRDFKRRRSPSPGYRDRRYSPPPASRRSPPPYKRSRRGSPRGYGPEDRFGYEYFGGYERGVGGRTGYADEKSYGRLAHRSAGGYHNGMSDMDINRGYGDLPSGGAQRSVNTWMLLNDFREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRSYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLNSSSSSKSGQASEPNSEEETDGGIKRRRHGRGPNKDNDFSAAPKAHPITSEPRRIQADILQAQSVVRKLDMEKGIEDNILCTSDHNRNDDKSHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGIDYYGMIEINEAKGFRHVRPEGEGHEETTKSGSEWEKKLDSFWQGRLNGQDPLELMTAKEKIDAAAADVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKLREDLYFQNYMNDPDAPGGTPVMQQPQKDKPLKRRLGGLEGRLKDDRGNRRDQDRSDKMNGDRPDSSPSNERQMGNHDEAMYDAYGGPGIPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDASGRKMRSGPHMGGPAPIIAVPPSFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01955 712 MobiDBLite consensus disorder prediction 266 287 - -
Spst5g01955 712 MobiDBLite consensus disorder prediction 1 106 - -
Spst5g01955 712 MobiDBLite consensus disorder prediction 15 30 - -
Spst5g01955 712 MobiDBLite consensus disorder prediction 549 586 - -
Spst5g01955 712 Pfam SERRATE/Ars2, N-terminal domain 184 266 IPR021933 -
Spst5g01955 712 MobiDBLite consensus disorder prediction 266 325 - -
Spst5g01955 712 PANTHER ARSENITE-RESISTANCE PROTEIN 2 35 710 IPR039727 GO:0006397
Spst5g01955 712 ProSitePatterns Zinc finger C2H2 type domain signature. 488 511 IPR013087 -
Spst5g01955 712 MobiDBLite consensus disorder prediction 31 72 - -
Spst5g01955 712 MobiDBLite consensus disorder prediction 530 620 - -
Spst5g01955 712 Pfam Arsenite-resistance protein 2 427 611 IPR007042 -
Spst5g01955 712 MobiDBLite consensus disorder prediction 288 305 - -
Spst5g01955 712 MobiDBLite consensus disorder prediction 653 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01955 Spst-Chr5 55082672 55091945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01955 72 712 C2H2 Transcription Factor Family AT2G27100 62.236 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01955 K27103 - gmx:100817569 1126.69