Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01932 ATGGAAAGCTTTATAGCAAAAATATGCCTCACACTCCTTTTGACATCTACAGTCTTCTCAGTAGCCTCATCAAGAAGAGGACCAGCTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTGCGCCATGCAAATACTACATCACTACTGCTGAAAGGAAGAGTCAACATTTCACATTGATTAAGCACAGAGCTACCTTCCGGGCAACGCTTGTCGAACATGCTCTAAACCAAGCCCTCATCATGGAGAAAGAAGCACTTGACTCTGATCAGACCAACATGCCAACAAGGAACCACAGAACCGTGCATGCTGACTGCTTGGAGCTCTATGGAAAAACCATCTTCCACCTCAACCGCACCCTTGAGTGTTTCCATGGGAAGCAAAACTGCTCATCGGTTGATGCACAGACCTGGCTCAGCACTGCCCTCACAAACATTCAGACCTGCCAAGATGGAACATTTGAACTTGGTGTTCAAGATTTCAAGGCTCCCAACAACAATAACAATGTCACTGAGATGATAAGGAACAGCTTGGCCATCAACATGGACTTCGTGAAACATGATCATCACACGGAAACAGCTCATGAAGATGCGTATCCAAGTTGGTTTTCAAGGCGAGAGAGGAAAATGTTGCAGTCCACAACCATAAAGGCTAATTTGGTGGTGGCAAAAGATGGTTCGGGGGATTTCAGCACTGTGCAAGATGCTCTCGATGCTGCAGCAAAGAGGAAGGTGAAGACGAGGTTTGTGATACATGTGAAGAAAGGGGTATATAAGGAGAATATTGAGGTTGCTGTGCACAATGATAACGTTATGCTGGTTGGTGATGGACTTAGAAACACTGTAATCACAAGTGGCAGAAGTGTTCAACAAGGTTACACCACTTATAGCTCTGCAACTGCTGGCATAGATGGTCTTCACTTCATTGCAAGGGACATCACCTTCCAAAACACGGCCGGACCTCAAAAGGGTCAAGCGGTGGCGCTCCGGTCGGCTTCCGATCTCTCGGTTTTCTACCGGTGCGCCATCATGGGCTACCAAGACACCCTCATGGCCCACGCACAACGGCAATTTTACAGGCAATGCTACATCTACGGCACCGTTGACTTCATATTTGGCAATGCAGCAGTAGTGTTCCAAAATTGTTACATTTACGCCAGAAAGCCCTTGGAGGGCCAAGCCAACATGATCACGGCCCAAGGTCGGGGCGACCCGTTTCAGAACTCCGGAATTTCCATCCACAATTCTCAAATTCGGGCCGCCCCGGATCTCAGGCCCGTTGTTGACAAATACAACACCTTCTTGGGTAGGCCATGGCAACAGTACTCAAGAGTTGTGGTCATGAAAACTTTCATAGACACTTTGGTTAGCCCACTGGGCTGGTCCCCATGGGATAATTCCAACTTTGCTCAAGACACACTTTATTATGGTGAGTATGAAAACTATGGGCCTGGTGCATCTACAAGTAACAGAGTGAAATGGCCCGGGTTTCATGTGATTACAAGCCCAGCTGAAGCCTCTCAATTTACAGTCACACGCCTCCTTGCAGGCCCAACGTGGTTGGGCTCTACAACTGTGCCATTTACCTCTGGTCTTTGA 1608 0.4789 MESFIAKICLTLLLTSTVFSVASSRRGPASSSNIDWWCNLTPHPAPCKYYITTAERKSQHFTLIKHRATFRATLVEHALNQALIMEKEALDSDQTNMPTRNHRTVHADCLELYGKTIFHLNRTLECFHGKQNCSSVDAQTWLSTALTNIQTCQDGTFELGVQDFKAPNNNNNVTEMIRNSLAINMDFVKHDHHTETAHEDAYPSWFSRRERKMLQSTTIKANLVVAKDGSGDFSTVQDALDAAAKRKVKTRFVIHVKKGVYKENIEVAVHNDNVMLVGDGLRNTVITSGRSVQQGYTTYSSATAGIDGLHFIARDITFQNTAGPQKGQAVALRSASDLSVFYRCAIMGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIYARKPLEGQANMITAQGRGDPFQNSGISIHNSQIRAAPDLRPVVDKYNTFLGRPWQQYSRVVVMKTFIDTLVSPLGWSPWDNSNFAQDTLYYGEYENYGPGASTSNRVKWPGFHVITSPAEASQFTVTRLLAGPTWLGSTTVPFTSGL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01932 535 FunFam Pectinesterase 216 535 - -
Spst5g01932 535 CDD PMEI-like_3 36 189 - -
Spst5g01932 535 PANTHER PECTINESTERASE 18 525 - -
Spst5g01932 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 187 IPR035513 -
Spst5g01932 535 SMART PMEI_2 29 183 IPR006501 GO:0004857
Spst5g01932 535 SUPERFAMILY Pectin lyase-like 217 534 IPR011050 -
Spst5g01932 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 184 IPR035513 -
Spst5g01932 535 NCBIfam pectinesterase inhibitor domain 1 184 IPR006501 GO:0004857
Spst5g01932 535 Gene3D - 216 535 IPR012334 -
Spst5g01932 535 Pfam Pectinesterase 222 520 IPR000070 GO:0030599|GO:0042545
Spst5g01932 535 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Spst5g01932 535 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01932 Spst-Chr5 54910388 54912133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01932 29 535 Carbohydrate Esterase AT5G51500 56.530 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01932 K01051 - gmx:100806133 907.516