Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01931 ATGGCTTCCTTCCATGTTCTCACGATTGTTGCATTCATTCTTCTAGCCAAACCTAGCATCACTTCAGCTTGTGAAAATGCTACTATCCCCACCAATTTCTCCAAAACCAAGATTGGTTACACTGCCACCAATTATGAAAAGACAACCACTCCATCCACTTCCTCACTAACCTTCAAAAACTACATTAAAACCTCTTGCAACTCAACCACATATCCATCAATATGCTACAGCACTTTATCCCCCTATGCTAAAACCATTGAAGCAGATCCTTTGAAGCTATGCAGTGTGTCTCTTTCCCTAGCCTATAATTCAGCAAAGAATGCATCTTCCACCATATCAAAGATTCTGAAGAAAAACAATCTGACAAGGATTGCTGAACAAGTGGTGCAAGATTGCTTGGGCAATGTGAAGGACTCCATTGGTGAACTCAAAGATTCCCTTGATTCCTTGGGCCATTTGGATGGGGCTGACAGAAAATTTCAGATCAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCAACGACCAAACTTGCTCAGATGGGTTTGATGAGATGAAAGTGAACTCCAATTTGACAGAGAAAATCAGAAAGGTTGTTTTGGATGTGGCCAGGAAGACTAGCAATGCTTTGTTAAAATACCACAAGAATATGGTACAAGTCTCAAATTTCGGTACTCTTTATCCTCAAAACCTTCCCTTTTCATCAGAGTAA 714 0.4076 MASFHVLTIVAFILLAKPSITSACENATIPTNFSKTKIGYTATNYEKTTTPSTSSLTFKNYIKTSCNSTTYPSICYSTLSPYAKTIEADPLKLCSVSLSLAYNSAKNASSTISKILKKNNLTRIAEQVVQDCLGNVKDSIGELKDSLDSLGHLDGADRKFQISNIKTWVSASITNDQTCSDGFDEMKVNSNLTEKIRKVVLDVARKTSNALLKYHKNMVQVSNFGTLYPQNLPFSSE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01931 237 SMART PMEI_2 57 213 IPR006501 GO:0004857
Spst5g01931 237 CDD PMEI-like_3 64 211 - -
Spst5g01931 237 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 211 IPR035513 -
Spst5g01931 237 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 211 - -
Spst5g01931 237 NCBIfam pectinesterase inhibitor domain 55 211 IPR006501 GO:0004857
Spst5g01931 237 Pfam Plant invertase/pectin methylesterase inhibitor 61 211 IPR006501 GO:0004857
Spst5g01931 237 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 216 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01931 Spst-Chr5 54902133 54908001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01931 39 224 Carbohydrate Esterase AT3G14310 26.702 4.52e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01931 - - gmx:100527443 334.724