Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01930 ATGTATCCCATCTTCTATATATCTAGATCCAAATCACACTTCACGCTCAAATTCTCAATCTTTCTTTCTCTCTCCCTTCTTAATTCTCAGATCTCAAACCAAAAAATGGGAAAATTTTCTCTTCTCCTTCTCCTTCTCCTCACCACCCTCCACATTTCCCTCACTCTCTCCAGCCCCACCAACTTCATCAAATCCTCGTGCAGCGCCACCCAGTACCCCGCCCTCTGCGTGGAGTCCCTCTCCGTCTACGCCGCCTCCATTCAGCAGGACCCCCACGAACTGGTTCAGACCGCCCTCTCTCTGGCCCTCAACAAAACCGAGTCCACCAAAACCTTCGTGACCAAGTGCAACAAGTTCAGGGGCCTCAAGCCCCGAGAATATGCCGCCCTCAAAGACTGCGCCGAGGAAATCAGCGACGGCGTGGACCGCCTCTCCCGGTCCCTGAAGGAGCTCAAGCTCTGCAAGCTCAAGGGCGAGGACTTCGCCTGGCACATAAGCAACGTGGAGACGTGGGTTAGCTCTGCACTCACCGACGAGAGCACTTGCGGCGACGGCTTCGCCGGAAAGGCTCTCAGCGGGAAGATGAAGGACGCCATCAGGGGCAGAATGGTCAATGTCGCTCAGGTCACTAGCAATGCGCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAG 675 0.5467 MYPIFYISRSKSHFTLKFSIFLSLSLLNSQISNQKMGKFSLLLLLLLTTLHISLTLSSPTNFIKSSCSATQYPALCVESLSVYAASIQQDPHELVQTALSLALNKTESTKTFVTKCNKFRGLKPREYAALKDCAEEISDGVDRLSRSLKELKLCKLKGEDFAWHISNVETWVSSALTDESTCGDGFAGKALSGKMKDAIRGRMVNVAQVTSNALSLINQYAAKH 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01930 224 CDD PMEI-like_3 65 222 - -
Spst5g01930 224 SMART PMEI_2 58 216 IPR006501 GO:0004857
Spst5g01930 224 FunFam Pectin methylesterase inhibitor 1 58 220 - -
Spst5g01930 224 NCBIfam pectinesterase inhibitor domain 41 220 IPR006501 GO:0004857
Spst5g01930 224 PANTHER PECTINESTERASE INHIBITOR-LIKE 41 216 - -
Spst5g01930 224 Pfam Plant invertase/pectin methylesterase inhibitor 61 216 IPR006501 GO:0004857
Spst5g01930 224 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 220 IPR035513 -
Spst5g01930 224 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 220 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01930 Spst-Chr5 54901095 54901769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01930 63 217 Carbohydrate Esterase AT3G14310 30.769 1.85e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01930 - - gmx:100305900 308.916