Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01922 ATGGCGATGCGCGACCTCGTTGCGGGTGCCGCCGCTTGCGGCGACTCTTCTTCTTCTTCCGGTAACCCTCTCGCTTCCCTCGCCAACGCCCTTATTGGCTCTTCCTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCCACGTCCACTCCCACTGACCCTGCCTCGCAGTTTTACTCCACCGCACTCCCTGCCAATCACCTTCCCGGCTCCGAATTCGATAAGCCTCTGTTGGAAGCAAACTCTCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCGCAAGTGGGCTCGAGGAGACTTGGGATGAGATTCAGCGCGAGGGCGGGTTTGCCGGACCGCGGCAACTGGTGCCGGCGGTTCAACAGCCGCCAAGTGCTGTAATTAGTGGTGGTTGTGCTGTGGACTTGATTTTGTTACTTGGATGCATGGAGATACTGAACATAGAAGAAGAGCTACGGATGCCTTTTCATCCTACCCCTCTTCCGATGCTGGGTTTATCTGAAGGTGATAAACAATGCATACGCGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGCAGATAAAAGTGAAGAATTTATTGATGCCCAAATGGGCTTGGGAATTGGTCCTGTAAATGCACTTCTATGCTCTCTAGATATTGACAGCAATGTCCGAGGTAAGGGACCCATGCCTGAAAGATTTCGGGAGCTTGAGGATTACTGGAATGAGTCTCAAGGCAATATGAGACCTGGTCCTCCTCCTGCAGATGGGTGGATTACTGAGTTTAGTCAACATAGGGGGAAATATGACAATCCTGATTCATGGGCTAGCTCATTTGAGCAACAGCATGGTGCGAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTGGACCAAATGCAAGGTATGAACATGTCAAACTTTGCTGCAATGGAACAGACTCGTATGCTTGCAAACACGTTGGCCCAAAATGGTGACCCTAAATTTCAGCTATTGCTTGTGTCTGGGGTTTTAATTGGAGCTTTTTCAAAGAGGAACTGGAACTCAAAATTCCTTCAATTTGTATCAAAGATGAGCCGTGGTGAGTTGATTATTGATGATAATCAAGTGAAAGAGAATGCATTACCTGCTTCTGGAGATTGGGCAACAGAATATGATCAGCAGTATAATCATGGCCATGCATGGGCTGGAGAATTTTTAAATGATAAGGCATGTGCTAGAGCACGGAACAATATTATTTTGCATGTTTATCATGGACCTGACCAGTGGGTGAATGAATTTACAACTAAAGGATTGCAGCATGATGCAGTTGATGACCAGTGGGTTGATGAATTTTCAAAGTTGAATGTTAGTGATTGGGCAGATGAATTTGGTCAGAAGTTTGGAGAGGCAGCCTTAGGAGATAGCACTTCTGATAGTTGGGCACAGGCTTATGATGAGTTCCTAAATGAGCAAGTTTCTGCCAAGCAGAAGTTAGACAGTTCGAGGGGTGTGTATGTCTTTTCAGATTTAAACCCTTATGTTGGTCATCCAAATCCACTAAAAGAAGGCCAAGATCTATTCAGAAAAGGACTTTTAAGTGAAGCAGTTCTAGCATTGGAAGCGGAAGTCTTAAAAAATCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGATCAACAGGCTATTGCAGCAATGATGCGTGCACAGGAGGCTGACCCGACAAATCTGGAAGTGCTTCTCGCACTTGGTGTTAGTCATACAAATGAACTAGAGCAATCGGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCACCACCCAAAATATGGAACACTTGCCCCACCTGACATGTCCGATTCCTTGTACTATGCTGATGTTGCTAGGTTATTCAACGAAGCTGCTGAACTCTCTCCTGATGATGCAGATGTCCACATAGTTCTTGGGGTCATGTATAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTTGAAAGAGCACTGAAACTTAAACCACAAGATTACTCATTATGGAACAAACTGGGTGCTACACAAGCAAACAGTATTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTATGACGAGTCCATTCGATATTATGTTCGAGCACTTGCCATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGCTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGAAATTTGGACCTTCTCCAGAAGGAGTTTCCACTGCAGTAA 2337 0.4527 MAMRDLVAGAAACGDSSSSSGNPLASLANALIGSSSKTQERLKEIPTSTPTDPASQFYSTALPANHLPGSEFDKPLLEANSQASEFLHRFRGASGLEETWDEIQREGGFAGPRQLVPAVQQPPSAVISGGCAVDLILLLGCMEILNIEEELRMPFHPTPLPMLGLSEGDKQCIRDRSSIMARHLFADKSEEFIDAQMGLGIGPVNALLCSLDIDSNVRGKGPMPERFRELEDYWNESQGNMRPGPPPADGWITEFSQHRGKYDNPDSWASSFEQQHGANGWVSEFEHSQLSSVDQMQGMNMSNFAAMEQTRMLANTLAQNGDPKFQLLLVSGVLIGAFSKRNWNSKFLQFVSKMSRGELIIDDNQVKENALPASGDWATEYDQQYNHGHAWAGEFLNDKACARARNNIILHVYHGPDQWVNEFTTKGLQHDAVDDQWVDEFSKLNVSDWADEFGQKFGEAALGDSTSDSWAQAYDEFLNEQVSAKQKLDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELEQSAALKYLYGWLRHHPKYGTLAPPDMSDSLYYADVARLFNEAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSIQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01922 778 ProSiteProfiles TPR repeat profile. 707 740 IPR019734 GO:0005515
Spst5g01922 778 Pfam Tetratricopeptide repeat 510 572 - -
Spst5g01922 778 SUPERFAMILY TPR-like 491 777 IPR011990 GO:0005515
Spst5g01922 778 ProSiteProfiles TPR repeat region circular profile. 707 739 - -
Spst5g01922 778 ProSiteProfiles TPR repeat profile. 540 573 IPR019734 GO:0005515
Spst5g01922 778 ProSiteProfiles TPR repeat profile. 673 706 IPR019734 GO:0005515
Spst5g01922 778 Pfam Tetratricopeptide repeat 639 672 IPR001440 GO:0005515
Spst5g01922 778 Pfam Tetratricopeptide repeat 708 739 IPR001440 GO:0005515
Spst5g01922 778 SMART tpr_5 540 573 IPR019734 GO:0005515
Spst5g01922 778 SMART tpr_5 707 740 IPR019734 GO:0005515
Spst5g01922 778 SMART tpr_5 639 672 IPR019734 GO:0005515
Spst5g01922 778 SMART tpr_5 673 706 IPR019734 GO:0005515
Spst5g01922 778 Gene3D Tetratricopeptide repeat domain 488 778 IPR011990 GO:0005515
Spst5g01922 778 FunFam Peroxisome biogenesis protein 5 489 777 - -
Spst5g01922 778 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 775 IPR024111 -
Spst5g01922 778 ProSiteProfiles TPR repeat profile. 639 672 IPR019734 GO:0005515
Spst5g01922 778 ProSiteProfiles TPR repeat region circular profile. 639 672 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01922 652 770 Glycosyltransferase AT3G04240 31.933 5.88e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01922 K13342 - gmx:100527272 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01922 5 54834392 54844715 Spst5g01922 5 54834392 54844715 ECH