Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01917 ATGAAAAGAACCAAACAATACCTCACGAGGAGCATGTCGTGGTCACCAAGAGAAGAACCACCAATAGTACTCATCTTCCTTCTTCTGATTGCCTTATTCGTTACAGTAATAACAGCAGAAGCACAAACAGCACCAACCTCGGATGCGCTTCTCTTGACGACCTTCAAACGGTTATACGTTTCCTCAGACCCCCGCGGCTTCCTCTCCGATTGGATCCCCAACGTGCCGACCCCGTGCGCCTGGCGCGGCGTCACCTGCTCCCCCGAGCCCCGCCGCGTCACCGCCCTCGACCTTGCCGACGCCGCCCTCTCCGGCACCCTCCACCTCCCCACCCTCACCTCCCTCCCATCGCTCCACACACTCGTCCTACGTGGCAACTCCTTCTCTACTTTCAACCTCACCGTTTCGCCGTTTTGCACTCTCCAAAAACTCGACCTCTCTTTCAACAACCTCTCCGGCAAGTTTCCTTTCGCAAACCTAACTCCGTGTAACCGCCTCACTTACTTAAACCTCTCAAATAATCTCATAACCGCTGGGCTCGGCCCCGGGCCCGGCCCTGGGCTTGGGCTTTCACTGGCCCAACTCGACTTATCCAGAAACCTTCTCTCCGAGGTGAGCCTTCTCGTCTCCGCTCTCGCGAGCTCTACTCTCGTTTTTCTAAACTTCTCCGACAACAGACTCGCGGGTCAACTCAGCGAGTCGCTTGTTTCGCGAAGCGCGAACCTCTCCACGTTGGACATCTCTTACAACCTTCTCTCCGGAACGGTGCCGCCTCAGCTGGTCAGTGACGCCGTTCAGGTTCTCGATTTCTCCTTCAACAACTTCTCGCGGCTGGATATCCTCACGTGCGGGAGCCTCACACGGTTGAGCTTCTCGCGCAATGTGCTCTCCGGAAACGAGTTTCCGCGCGGGTTGACCGGCTGCTACAACCTCGAGGATCTGGATCTTTCTCGCAACGAGTTCGGCCCCGAGATTCCGGGGGAGATTCTTCGGAGTTTGACGAGCTTGAAGAATTTGTTTCTCGAGCGGAACAAATTCTCCGGCGAGATTCCGAGCGAGCTTGGAAGGCTCTGTGAAAATCTCGTTGAACTTGATCTCTCCGAGAACATGATTTATGGTGAGTTGCCTTTGAGTTTCGTGAACTGTTCTTCACTGCGGAGTTTGAACCTCGCGAGGAACTACCTCTCTGGAAACTTCCTCGTTTCCGTGGTGAGCAAGCTTCAGAGTCTTGAGTATCTAAACGCGGCGTTTAACAACATAACGGGACCGGTTCCTTTGTCGCTTGTTAACCTGAAACGGCTTCGGGTGCTGGACTTGAGCTCGAACCGGTTAAACGGCAATGTTCCGTCGTCGTTTTGTCCTTCCGAGTTGGAGAAGTTGATCCTCGCTGGCAATTACCTTTCCGGGACGGTGCCGTCACAGCTCGGTGATTGTAAGAATTTGAGAAGCATCGATTTCAGCTTTAACAGCTTGAACGGTAAGATTCCGTGGGAGGTTTGGGCTTTGCCTAACCTCTCTGATTTGATTATGTGGGCCAATAATCTCACTGGGGAAATCCCAGAGGGAATTTGTGTTAAAGGAGGGAACTTGGAGACTTTGATTCTCAACAATAACTTTATTTCTGGGTCAATTCCGAAGTCAATTGCGAATTGCACCAACATGATATGGGTGTCGCTGGCGAGCAACCGGTTAACCGGGGAGATACCGGCTGGGATTGGGAATTTGAATGCATTGGCGATTCTCCAGCTGGGGAACAACTCGCTGAGTGGAAGGATTCCACCGGAGATTGGCAAGTGTAGGAGGTTGATATGGTTGGATTTGAATAGCAATAACCTAACTGGGAATATCCCGTTCGAGCTTGCTGATCAAGCGGGGTTGGTTATCCCGGGTAGGGTTTCAGGGAAGCAGTTTGCGTTTGTGAGGAACGAGGGTGGGACTAGTTGCAGGGGTGCTGGTGGGTTGGTTGAGTTTGAGGATATCAGGACAGAGAGGCTTGAGGGTTTTCCTATGGTGCATTCGTGCCCGTTGACGCGGATTTACTCCGGTTGGACCGTGTATACTTTTGCTTCCAATGGGAGCATGATCTACCTTGACCTTTCCTACAACTTGTTGTTTGGGAGTATTCCTGGGAATTTGGGTGGAATGGCCTATTTGCAGGTGTTGAATTTGGGGCACAATTCGTTGAGTGGGAACATTCCAGATAGTTTTGGTGGTTTGAAAGCAATTGGGGTGCTTGATCTGTCTCATAACAGTCTTAATGGGTCCATCCCTGGGTCATTGGAGAGTCTTTCTTTTCTCAGTGACCTTGATGTATCTAATAATAATCTCACTGGGTCCATTCCTTCTGGAGGTCAGTTTACAACTTTTCCAGCTTCTAGGTACGAGAACAATACTGGCCTTTGTGGCCTGCCGTTGCCAGCGTGTGGTGCTTCGAAAAGTCGATCGGTGGGCGTTGAGGGTTGGAAGAAGAAGCAGCCTGTAGCAGCTGGGGTTGTCATTGGTTTGCTCTGCTTCCTCTTGTTTGCGCTGGGGCTTGTGTTGGCTTTGTACAGGGTGAGGAAGGCGCAGAGGAAGGAGGAGATTAGAGAAAAGTATATAGAGAGTCTTCCGACCTCGGGGAGCAGTAGTTGGAAGCTTTCCAGCTTTCCTGAGCCTCTGAGCATCAATGTCGCCACCTTTGAGAAGCCTTTGCGGAAGCTGACGTTTGCACATCTTCTAGAGGCTACAAATGGTTTCAGTGCTGAGAGTTTGATCGGTTCTGGGGGATTTGGTGAAGTGTACAAGGCTAAGCTGAAAGATGGCTGTGTTGTTGCCATCAAGAAGCTCATTCATGTGACAGGTCAGGGAGATAGGGAGTTCATGGCTGAGATGGAAACTATTGGGAAGATTAAGCATAGGAACCTGGTTCAGCTTCTGGGTTACTGTAAAGTTGGGGAGGAGAGGCTTCTTGTGTATGAGTTCATGAAATGGGGAAGTCTTGAGGCTGTTTTGCATGAGAGGGCAAAAGGTGGAGGTTCAAAGCTTGATTGGGGTGCAAGAAAGAAGATTGCCATAGGGTCAGCAAGAGGACTTGCATTTCTTCACCATAGTTGCATTCCTCACATTATACACCGGGACATGAAGTCCAGCAACATTCTTCTTGATGAAAATTTCGAGGCTAGGGTTTCTGATTTTGGCATGGCAAGATTGGTTAATGCCCTCGATACTCATCTCACTGTCAGCACACTTGCCGGAACACCCGGTTATGTACCCCCTGAGTACTATCAGAGTTTTCGATGTACTGCAAAAGGGGATGTCTATAGCTATGGTGTCATACTGCTTGAGCTTCTATCAGGGAGAAGACCAATAGACTCATCTGAGTTTGGTGATGACAGCAATCTTGTTGGATGGTCTAAGAAGCTTTACAAAGAGAAAAGAATTAATGAAATACTTGATCCTGATTTAGTTGTGCAAACATCTAGTGAAAGTGAACTATTGCAATATTTGAGAATTGCCTTTGAATGTCTAGACGAGAGACCATACCGGCGTCCTACAATGATACAAGTGATGGCCATGTTCAAAGAGCTTCAGGTTGACACAGATAATGATATGCTTGATAGCTTCTCTCTGAGAAACCATGTCATTGATGAAGCATGA 3636 0.4953 MKRTKQYLTRSMSWSPREEPPIVLIFLLLIALFVTVITAEAQTAPTSDALLLTTFKRLYVSSDPRGFLSDWIPNVPTPCAWRGVTCSPEPRRVTALDLADAALSGTLHLPTLTSLPSLHTLVLRGNSFSTFNLTVSPFCTLQKLDLSFNNLSGKFPFANLTPCNRLTYLNLSNNLITAGLGPGPGPGLGLSLAQLDLSRNLLSEVSLLVSALASSTLVFLNFSDNRLAGQLSESLVSRSANLSTLDISYNLLSGTVPPQLVSDAVQVLDFSFNNFSRLDILTCGSLTRLSFSRNVLSGNEFPRGLTGCYNLEDLDLSRNEFGPEIPGEILRSLTSLKNLFLERNKFSGEIPSELGRLCENLVELDLSENMIYGELPLSFVNCSSLRSLNLARNYLSGNFLVSVVSKLQSLEYLNAAFNNITGPVPLSLVNLKRLRVLDLSSNRLNGNVPSSFCPSELEKLILAGNYLSGTVPSQLGDCKNLRSIDFSFNSLNGKIPWEVWALPNLSDLIMWANNLTGEIPEGICVKGGNLETLILNNNFISGSIPKSIANCTNMIWVSLASNRLTGEIPAGIGNLNALAILQLGNNSLSGRIPPEIGKCRRLIWLDLNSNNLTGNIPFELADQAGLVIPGRVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRTERLEGFPMVHSCPLTRIYSGWTVYTFASNGSMIYLDLSYNLLFGSIPGNLGGMAYLQVLNLGHNSLSGNIPDSFGGLKAIGVLDLSHNSLNGSIPGSLESLSFLSDLDVSNNNLTGSIPSGGQFTTFPASRYENNTGLCGLPLPACGASKSRSVGVEGWKKKQPVAAGVVIGLLCFLLFALGLVLALYRVRKAQRKEEIREKYIESLPTSGSSSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVQLLGYCKVGEERLLVYEFMKWGSLEAVLHERAKGGGSKLDWGARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGRRPIDSSEFGDDSNLVGWSKKLYKEKRINEILDPDLVVQTSSESELLQYLRIAFECLDERPYRRPTMIQVMAMFKELQVDTDNDMLDSFSLRNHVIDEA 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01917 1211 FunFam Serine/threonine-protein kinase BRI1-like 1 632 689 - -
Spst5g01917 1211 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 401 628 - -
Spst5g01917 1211 Gene3D Transferase(Phosphotransferase) domain 1 988 1206 - -
Spst5g01917 1211 Pfam Leucine Rich Repeat 433 453 IPR001611 GO:0005515
Spst5g01917 1211 Pfam Leucine Rich Repeat 529 551 IPR001611 GO:0005515
Spst5g01917 1211 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 687 808 - -
Spst5g01917 1211 Gene3D Ribonuclease Inhibitor 48 162 IPR032675 -
Spst5g01917 1211 SUPERFAMILY L domain-like 46 321 - -
Spst5g01917 1211 Gene3D Phosphorylase Kinase; domain 1 875 987 - -
Spst5g01917 1211 SUPERFAMILY RNI-like 220 622 - -
Spst5g01917 1211 SUPERFAMILY Protein kinase-like (PK-like) 893 1186 IPR011009 -
Spst5g01917 1211 FunFam Brassinosteroid LRR receptor kinase 988 1191 - -
Spst5g01917 1211 SUPERFAMILY L domain-like 685 807 - -
Spst5g01917 1211 SMART LRR_typ_2 715 738 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 431 454 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 115 138 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 575 599 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 502 526 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 763 786 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 308 332 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 739 762 IPR003591 -
Spst5g01917 1211 SMART LRR_typ_2 333 357 IPR003591 -
Spst5g01917 1211 Pfam Protein kinase domain 914 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01917 1211 SMART serkin_6 912 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01917 1211 Gene3D Ribonuclease Inhibitor 191 809 IPR032675 -
Spst5g01917 1211 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 529 1189 - -
Spst5g01917 1211 Pfam Brassinosteroid receptor island domain 625 688 IPR045381 -
Spst5g01917 1211 Pfam Leucine rich repeat N-terminal domain 47 87 IPR013210 -
Spst5g01917 1211 FunFam Leucine-rich repeat receptor protein kinase EMS1 301 400 - -
Spst5g01917 1211 Gene3D - 632 689 - -
Spst5g01917 1211 Pfam Leucine rich repeat 718 776 IPR001611 GO:0005515
Spst5g01917 1211 ProSiteProfiles Protein kinase domain profile. 912 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01917 1211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1035 1047 IPR008271 GO:0004672|GO:0006468
Spst5g01917 1211 FunFam serine/threonine-protein kinase BRI1-like 2 873 987 - -
Spst5g01917 1211 PRINTS Leucine-rich repeat signature 431 444 - -
Spst5g01917 1211 PRINTS Leucine-rich repeat signature 141 154 - -
Spst5g01917 1211 ProSitePatterns Protein kinases ATP-binding region signature. 918 941 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01917 Spst-Chr5 54799781 54803416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01917 47 1204 Receptor kinase-like Gene Family AT1G55610 62.638 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Spst5g01917 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01917 - - gmx:102670093 1955.64