Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01915 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGTGATTGGGGTCTTGCTAGCCCAAGTCCAAGAACATTTTTCTCCAGAATGTTAGAGGAAGACACTGTAACAAGATCAATCTCAGAACATTCTGGGAGTGGTAGAACTGGGGAATTCTTTTCAGGACCTTATGAGCCTAGTGAGAAAGGGAAGGGGAACATGAAGGATGGGGCACAAGATGGTGATTCTGGAGCCCAATTGACCAACCCGAGATTTCAGACTGAGCAGAAGTCGAATTCCCGGGGTGGTCTTGTGGAAAGAATAGCTGCTAGAGCTGGGTTTAATGCTCCAAGGCTGAACACTGAAAGCATTAGATCTACTGACCTTTCGCTCAATTCCGACATTCAGTCTCCTTACTTGACAATCCCGCCCGGTCTCAGTCCTACAACGCTTTTAGATTCTCCAGTGTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACTACTGGAAAGTTCCTGTTCATGTCAAATGGCAACATGCGCTCAGAATTATCATCTGATGCTCCAGAAAAATGTGAAGATAATGGCTTTGGGGATATCTATACATCATCTTTTGCTTTTAAGCCTGCAACAGGCTCAGGCTCCTCTTTTTATCATGGTGCTGGAAGAAAAATAAATCCAACTACACTTCCTCAACAATCCCGTCCTGGGATTGAGGTTTCGGCTCAGTCAGAAAATTCTTTTCAATCTCAAAGTGTTGATGCTGTCAAAGTTCAAACTGAGAACAAAATTGGTCTTCAGGCAGACTATGTCGAGTCGCCTCCTGAAAAAGATACTAAAATGTTCCCAGCTGATCAAAGGGCTTTTGATGCTGTTGGTGCTGGCATTGAACATTCTACACCAATTGAAGAACATGGAGATGAAGAAGGAGATCAAAGAGGCAATGGAGATTCAATGACCGGTGGTGTTGGTGGTGCGCCATCTGATGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTTAAAGGCAGCGAGTACCCTCGAAGTTACTACAAGTGCACACATCCAAACTGTCAGGTTAAGAAGAAAGTAGAACGATCCCATGAGGGCCATATAACTGAGATCATCTACAAGGGAACACACAACCATCCAAAACCTCCACCAAATCGCCGGTCAGGTATAGGTTCAGTTAACCCTCATACTGACATGCAAATCGACAACCCTGAACATGTTGAACCACACATTGGTGGTGATTGTGACATGGGCTGGGGTAATGTACAAAAGGGAAATATAGCTGGAGCTGCTAACTGGAAACACGAAAACCTTGAGGCAACATCATCAGCATCTGTTGGCCCTGAATACTGCAACCAGTCCACCAATTTGCAGACTCAAAATGGTACTCACATTGATTCAGGAGAGGCAGTTGATGGATCGTCTACTTTTTCCAACGAAGAAGACGAAGACGACCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGACCTGAGTGGAGCTACTAGAGCCATCCGGGAGCCTAGAGTTGTTGTGCAGACTACCAGTGAAGTAGATATCCTCGATGATGGTTACCGGTGGCGGAAATATGGACAAAAAGTTGTCAAAGGAAATCCCAATCCAAGGAGTTACTACAAGTGTACGAATGCAGGGTGCACAGTAAGGAAACACGTGGAGAGAGCATCACACGACCTTAAATCAGTAATCACTACGTACGAGGGAAAGCACAACCATGATGTGCCTGCTGCTCGTGCCAGCAGCCATGTCAATGCTAGCGCTTCCAACTCCGTCCAAGCTTCTGGTGTTCTTCCGACCCATGTTCATAGACCTGAACCATCTCAAGTACACAATGGCATTGGAAGGCTTGAGAGGCCATCCCTCGGCTCGTTCAACCTACCGGGAAGGCAGCAGCTAGGACCTTCCCACGGCTTCTCCTTCGGCATGAACCAACCGATGCTATCGAATATGGCGATGTCAGGGTTAGGCCATGTGCAAGCAAAGCTTCCTGTCATGCCTGTTCATCCATTCTTGGCACAACAACAACAGCAACGCCCTTCAAACGATTTTGGTTTCATGATGCCAAAGGGAGAGCCAAATGTGGAGGCTATTCCTGAACGCGGTGGTGCCCTTAACCTGCCAAATGGGTCATCAGTGTACCAAGAAATCATGAGTCGCATGCCTCTTGGACCTCATACGTAA 2241 0.4632 MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDTVTRSISEHSGSGRTGEFFSGPYEPSEKGKGNMKDGAQDGDSGAQLTNPRFQTEQKSNSRGGLVERIAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRSELSSDAPEKCEDNGFGDIYTSSFAFKPATGSGSSFYHGAGRKINPTTLPQQSRPGIEVSAQSENSFQSQSVDAVKVQTENKIGLQADYVESPPEKDTKMFPADQRAFDAVGAGIEHSTPIEEHGDEEGDQRGNGDSMTGGVGGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGIGSVNPHTDMQIDNPEHVEPHIGGDCDMGWGNVQKGNIAGAANWKHENLEATSSASVGPEYCNQSTNLQTQNGTHIDSGEAVDGSSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYADLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNASASNSVQASGVLPTHVHRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQPMLSNMAMSGLGHVQAKLPVMPVHPFLAQQQQQRPSNDFGFMMPKGEPNVEAIPERGGALNLPNGSSVYQEIMSRMPLGPHT 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01915 746 FunFam WRKY transcription factor 33 522 588 - -
Spst5g01915 746 MobiDBLite consensus disorder prediction 440 506 - -
Spst5g01915 746 Gene3D WRKY domain 314 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 MobiDBLite consensus disorder prediction 290 326 - -
Spst5g01915 746 SMART WRKY_cls 319 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 SMART WRKY_cls 535 594 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 ProSiteProfiles WRKY domain profile. 530 595 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 MobiDBLite consensus disorder prediction 73 92 - -
Spst5g01915 746 Pfam WRKY DNA -binding domain 536 592 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 Pfam WRKY DNA -binding domain 320 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 MobiDBLite consensus disorder prediction 440 471 - -
Spst5g01915 746 ProSiteProfiles WRKY domain profile. 320 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 SUPERFAMILY WRKY DNA-binding domain 527 595 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 SUPERFAMILY WRKY DNA-binding domain 318 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 MobiDBLite consensus disorder prediction 370 397 - -
Spst5g01915 746 Gene3D WRKY domain 522 588 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst5g01915 746 FunFam WRKY transcription factor 310 379 - -
Spst5g01915 746 MobiDBLite consensus disorder prediction 32 95 - -
Spst5g01915 746 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 609 IPR044810 GO:0003700
Spst5g01915 746 MobiDBLite consensus disorder prediction 291 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01915 Spst-Chr5 54788250 54791901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01915 1 741 WRKY Transcription Factor Family AT5G56270 49.482 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst5g01915 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01915 K18835 - gmx:100796545 1303.12