Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01904 ATGGAAAGTGAAAGAGAGGACAACAACAAAGGCACCGATGCAACACATGCTGCAATCTCTAGCACACTTAAAATTAAGATTGTAAGTTGCAGCAAACCAGGTGGGGAGAGTTTAGACAACTCAAACTTACCTTCACCAAACATAAACAATGCCATAGAATCATCACCTTATGGTTCTCCTCTTGTGTCACCACCTTCATCAGCATTTGTTTCAGCATTGCAGTCTCCATATATATCTCCAAGGGCCATAATCCCAGACCCACCTAATGGATCTCCTTTGGAAAACCAACCACCACTGCTAACAACAACCACTTCCACAACCAACCCATCCACCCCAGAAGATGTGCCAAGCAGTTCCTACACTCCCCCTTCCGATCAATACGAGTTCTCTGATGACACTGCTGACACAAGGCTCAAATACGTGACATGTGTTCCTGAACCGGCTCCTCCACGCATCTCATTCTCATTTCCAGTCCCTAGAATTTCCTTTGCTAAAGGCCCTGTCTCACCTGCTGCCAATGCCAAACTCAGAAGCTGTGATGTCTACATTGGATTCCATGGCCAGAACCCCAACTTGGTGCGCTTCTGCAAGTGGCTTAAGTCTGAGCTTGAGCTTCAAGGGATCGATTGCATGCTTGCTGATAGAGCAAAGTACTCAGACAGTCAGAGCCATGAAATTGCTGATGGAGTCATTTGCTCAGTGGCTTTTGGAGTGGTGGTAGTTACAAGTTCCAGCTTCCTCAACCATTTTAGCATGGAGGAGGTGAGATTCTTTGCCCAAAAGAAGAACTTGATTCCTCTCTTATTTGACACAGGACCTTCAGAGATTATGGCTCTTCTTAACTGCAACTCAATTGACAAAGAATGTAAAGAGGCAATAGATGGTATAATGAAGTGCAATGAATTCAATCTAGAGGCTAATGATGGTAATTGGCGAAGCAGCATAGCAAAAGCTGCGGGTATTTTAAGAGCAAGACTTGGTAGAAAGAATGCTGAGCAGAAGGATAAAATGCAAGGACTTGAGAACTTACCCTTTCCAAGGAACCCATACTTCGTAGGAAGAGAGAAGGAGATTATGGAGATTGAAGGTCTTTTTTTTGGTCGAGGGAATTGCATGGAACAAGTCCAAGATCATTGTAGGTCATTTACCAAAGGGGAAGCAAGTGGAAGTGGACAATCTGAAGGCCTTGCAGATGAGGAAAGTGAACCAGTGATAGGTAGGTGTGGGAGGTATATTAGCTTAGAGATGGGAAGGAGCAAAGAACCAACTTTAGAGGCTTGGGTTGAACCGATCATAGGAAACAATTCTTTGAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAACTACAAGAGTGCGTGTAGCAGTGTTATTTGCATTAATGGGGTTTCTGGGATTGGGAAGTCAGAGCTGGCACTAGAATTTGCCCATAGATATCACCAGAGGTACAAAATGGTCTTGTGGGTTGGTGGTGAAGCCAGGTATCTGAGGCAGAACTTATTGAACTTGTCTCTCAATTTGGGATTGGATGTTGGTGCTGATTCTGAAATCGAAAGGGGTAGGATTCGTAGCTTCGAGGAGCAAGAATTTGAGGCATTCAAGAGAGTGAAGAGGGAACTGTTTGGTGAGACTCCTCACTTGCTGATAATTGACAATCTTGAGACAGAAGTGGAATGGTGGGAAGGGAAGGATCTGTATGACTTGATACCACGAAACACTGGAGGGACACATGTGATTGTTACTACTAGATTGTCCAAAGTAATGAGCTATGACACTATTCAGCTTCCACCTTTGCCTTTATCTGATGCAATGATTCTGATGATAGGAAGAAAAAGGAGAGAGTATCCAGCAGATGAGATAGACTTGCTTGAAAAATTCAATGAGAAACTTGGAAGGTTGAGCTTTGGTTTGTGGATGATTGGTTCATTGTTGGCTGAACTTTCAATAGGCCCTTCTTCTCTCTTTGAGGCCATAAACCAGGTGCCACTCAATGAAGATTCAAACTCTTGCTATATGAGCATTGCAGAAGGGCAATGGTACAAGAGCAACCCTTTTCTCCTGAAGACCCTTCTCTTTTGCTTGGAAACTTTGGAGAAAACTAAAGCTAAAGGGAACCTCTTGGCCATAAGAATGCTGCTTGTAAGTGGCTGGTTTTCTCCTGCTCCCATTTCGGCCAGTTTATTAGCCAATGCAGCAAAGAGTATTCCTACAGTCGAAAGCCATCTCAAGAAGTGGACCAAATCTCTGAGCCTAACACCAAGTTGTTTTTCATCGCGGACGTGGAGAATCGAAGAAGATTCAGCAATGCTTCTTGTGAAAATGGGACTGGCTAGAAGGGCTAATCAACATGATGGATATTGGCTTCATTTCCACCCCATAACACAAGCATTTGCCAAAATAAAAGGTGGTTTGCAATATGCCAAGGCTGCAATTCAAGGAGTGAGGAAAATGGGCAGCCATGTAAACTCAGATCATTTGTGGGCCTCAGCTTTCCTTGTGTTTGGGTTCAAATCTGAACCCCCACTTGTGCAGCTGAAGGCAATTGACATGGTTCTGCACATCAAGAGAACAGCTCTCCCTCTAGCAATTCAAGCCTTCACCACTTTCTCAAGATGCAATTCATCCTTGGAGCTCTTGAGGGTGTGCACCAATGCACTGGAGGAAGTTGAGAAGTCCTTTGTGTCTCAAATCCAAGATTGGTCTTCCCATGGTTCAATCTGTTGGAAAAGGAGGCTGCAAAGAGGTCAAAAAGTAGATGAATATGTGTGGCAGGATGTGACCTTGTTAAAGGCAACACTGCTGGAGACAAGGGCAAAGTTGCTAGCAAGAGGGGGGCATCTAGACAGTGCCAAGGAGCTGTGCAGAACATGCATCAGTATCAGAACTGTGATGCTTGGCCATAACCATGCCCAGACCTTGACTGCTCAAGACACATTGGCAAGATTGGTGAGAATGAGGAGCAAAATATGA 2970 0.4428 MESEREDNNKGTDATHAAISSTLKIKIVSCSKPGGESLDNSNLPSPNINNAIESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPPLLTTTTSTTNPSTPEDVPSSSYTPPSDQYEFSDDTADTRLKYVTCVPEPAPPRISFSFPVPRISFAKGPVSPAANAKLRSCDVYIGFHGQNPNLVRFCKWLKSELELQGIDCMLADRAKYSDSQSHEIADGVICSVAFGVVVVTSSSFLNHFSMEEVRFFAQKKNLIPLLFDTGPSEIMALLNCNSIDKECKEAIDGIMKCNEFNLEANDGNWRSSIAKAAGILRARLGRKNAEQKDKMQGLENLPFPRNPYFVGREKEIMEIEGLFFGRGNCMEQVQDHCRSFTKGEASGSGQSEGLADEESEPVIGRCGRYISLEMGRSKEPTLEAWVEPIIGNNSLKRLKNKKSKSGNYKSACSSVICINGVSGIGKSELALEFAHRYHQRYKMVLWVGGEARYLRQNLLNLSLNLGLDVGADSEIERGRIRSFEEQEFEAFKRVKRELFGETPHLLIIDNLETEVEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMIGRKRREYPADEIDLLEKFNEKLGRLSFGLWMIGSLLAELSIGPSSLFEAINQVPLNEDSNSCYMSIAEGQWYKSNPFLLKTLLFCLETLEKTKAKGNLLAIRMLLVSGWFSPAPISASLLANAAKSIPTVESHLKKWTKSLSLTPSCFSSRTWRIEEDSAMLLVKMGLARRANQHDGYWLHFHPITQAFAKIKGGLQYAKAAIQGVRKMGSHVNSDHLWASAFLVFGFKSEPPLVQLKAIDMVLHIKRTALPLAIQAFTTFSRCNSSLELLRVCTNALEEVEKSFVSQIQDWSSHGSICWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLGHNHAQTLTAQDTLARLVRMRSKI 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01904 989 PANTHER DNA REPAIR PROTEIN RADA 51 984 - -
Spst5g01904 989 MobiDBLite consensus disorder prediction 81 129 - -
Spst5g01904 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 668 IPR027417 -
Spst5g01904 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 179 279 IPR035897 -
Spst5g01904 989 MobiDBLite consensus disorder prediction 31 66 - -
Spst5g01904 989 SMART AAA_5 454 619 IPR003593 GO:0016887
Spst5g01904 989 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 160 298 - -
Spst5g01904 989 MobiDBLite consensus disorder prediction 95 129 - -
Spst5g01904 989 Coils Coil 323 343 - -
Spst5g01904 989 Gene3D - 429 594 IPR027417 -
Spst5g01904 989 MobiDBLite consensus disorder prediction 34 66 - -
Spst5g01904 989 Gene3D - 165 295 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01904 Spst-Chr5 54718003 54720972 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01904 - - gmx:100781208 1769.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01904 5 54718003 54720972 Spst5g01904 5 54718003 54720972 ECH