Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01897 ATGGCAGCCTCAGCCTCATCCATGATCTCAACTTCTGCAGCCTTATCCCCCACCATCCAAAAGCACCATCATCTGAAGCCCTCCAACGTGTGCTTTCAGGGTCTGAGACCCCTCACAAGGTCCACAGCCTCAGCCAGAGTGAGCACCTCCAAAAGGGTCCCTCGAGGTAGTGGTGTTGTGAAGGCTGAACTCAACTCAGCCCTTGTGATAAGCCTCAGCACTGGCCTCTCCCTCTTCTTGGGGAGGTTTGTGTTCTTCAACTTCCAAAGGGAGAACGTGGCAAAGCAAGTCCCTGAGCAGAACGGGCTCACACACTTCGAGGCTGGTGACACACGTGCCAAGGAGTATGTCAGCCTCCTCAAATCCAACGACCCTGTTGGATTCAACATAGTTGATGTCTTGGCTTGGGGTTCCTTAGGTCATGTTGTTGCTTATTATATCTTGGCCACCACTAGCAATGGCTATAACCCTGCATTCTTTGGTTGA 486 0.5185 MAASASSMISTSAALSPTIQKHHHLKPSNVCFQGLRPLTRSTASARVSTSKRVPRGSGVVKAELNSALVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSLGHVVAYYILATTSNGYNPAFFG 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01897 161 Gene3D - 66 160 IPR023618 GO:0009522|GO:0015979
Spst5g01897 161 PIRSF PsaK 1 161 IPR016370 -
Spst5g01897 161 Pfam Photosystem I psaG / psaK 65 155 IPR000549 GO:0009522|GO:0015979|GO:0016020
Spst5g01897 161 ProSitePatterns Photosystem I psaG and psaK proteins signature. 127 144 IPR000549 GO:0009522|GO:0015979|GO:0016020
Spst5g01897 161 NCBIfam photosystem I reaction center subunit V 69 156 IPR017494 GO:0009522|GO:0009535|GO:0015979
Spst5g01897 161 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 21 160 IPR016370 -
Spst5g01897 161 FunFam Photosystem I reaction center subunit V 66 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01897 K08905 - gmx:100305786 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01897 5 54672313 54672798 Spst5g01897 5 54672313 54672798 ECH